STRINGSTRING
I1PNF0_ORYGL I1PNF0_ORYGL I1PPJ5_ORYGL I1PPJ5_ORYGL I1PZM8_ORYGL I1PZM8_ORYGL I1Q3J1_ORYGL I1Q3J1_ORYGL I1Q504_ORYGL I1Q504_ORYGL I1Q8Z3_ORYGL I1Q8Z3_ORYGL I1QA65_ORYGL I1QA65_ORYGL I1QCU5_ORYGL I1QCU5_ORYGL I1QDF3_ORYGL I1QDF3_ORYGL I1QG23_ORYGL I1QG23_ORYGL I1QQQ1_ORYGL I1QQQ1_ORYGL I1QTG2_ORYGL I1QTG2_ORYGL I1R3L2_ORYGL I1R3L2_ORYGL I1PIQ9_ORYGL I1PIQ9_ORYGL I1PIH9_ORYGL I1PIH9_ORYGL I1PI19_ORYGL I1PI19_ORYGL I1PH27_ORYGL I1PH27_ORYGL I1PGJ3_ORYGL I1PGJ3_ORYGL I1PFV8_ORYGL I1PFV8_ORYGL I1PCT5_ORYGL I1PCT5_ORYGL I1PCP0_ORYGL I1PCP0_ORYGL I1PAL3_ORYGL I1PAL3_ORYGL I1P9J8_ORYGL I1P9J8_ORYGL I1P5V9_ORYGL I1P5V9_ORYGL I1P3D3_ORYGL I1P3D3_ORYGL I1P1R2_ORYGL I1P1R2_ORYGL I1P140_ORYGL I1P140_ORYGL I1P0T4_ORYGL I1P0T4_ORYGL I1NX64_ORYGL I1NX64_ORYGL I1NWG1_ORYGL I1NWG1_ORYGL I1NWE9_ORYGL I1NWE9_ORYGL I1NWB1_ORYGL I1NWB1_ORYGL I1NSG9_ORYGL I1NSG9_ORYGL I1NRI8_ORYGL I1NRI8_ORYGL I1NRC0_ORYGL I1NRC0_ORYGL I1NLM0_ORYGL I1NLM0_ORYGL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
I1PNF0_ORYGLElongation factor G, chloroplastic; Chloroplast-localized elongation factor EF-G involved in protein synthesis in plastids. Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl- tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (702 aa)
I1PPJ5_ORYGLUncharacterized protein. (430 aa)
I1PZM8_ORYGLRECA_2 domain-containing protein. (619 aa)
I1Q3J1_ORYGLTr-type G domain-containing protein. (997 aa)
I1Q504_ORYGLGHMP_kinases_N domain-containing protein. (994 aa)
I1Q8Z3_ORYGLS5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (276 aa)
I1QA65_ORYGLRibosomal_S5_C domain-containing protein. (121 aa)
I1QCU5_ORYGLUncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (412 aa)
I1QDF3_ORYGLLon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family. (976 aa)
I1QG23_ORYGLMevalonate kinase. (390 aa)
I1QQQ1_ORYGLLon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import; Belongs to the peptidase S16 family. ECO:0000256|PROSITE-. (884 aa)
I1QTG2_ORYGLMevalonate kinase. (401 aa)
I1R3L2_ORYGLUncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (149 aa)
I1PIQ9_ORYGLTr-type G domain-containing protein. (843 aa)
I1PIH9_ORYGLDNA_mis_repair domain-containing protein. (724 aa)
I1PI19_ORYGLTr-type G domain-containing protein. (1029 aa)
I1PH27_ORYGLUncharacterized protein. (506 aa)
I1PGJ3_ORYGLS5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (272 aa)
I1PFV8_ORYGLUncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (223 aa)
I1PCT5_ORYGLElongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (757 aa)
I1PCP0_ORYGLS5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (326 aa)
I1PAL3_ORYGLLon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family. (1058 aa)
I1P9J8_ORYGLUncharacterized protein. (512 aa)
I1P5V9_ORYGLUncharacterized protein. (378 aa)
I1P3D3_ORYGLDNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1524 aa)
I1P1R2_ORYGLUncharacterized protein. (923 aa)
I1P140_ORYGLTr-type G domain-containing protein. (996 aa)
I1P0T4_ORYGLTr-type G domain-containing protein. (843 aa)
I1NX64_ORYGLUncharacterized protein. (997 aa)
I1NWG1_ORYGLDiphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids. Belongs to the diphosphomevalonate decarboxylase family. (354 aa)
I1NWE9_ORYGLMDD_C domain-containing protein. (674 aa)
I1NWB1_ORYGLS5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (501 aa)
I1NSG9_ORYGLGHMP_kinases_N domain-containing protein. (401 aa)
I1NRI8_ORYGLTr-type G domain-containing protein. (827 aa)
I1NRC0_ORYGLTr-type G domain-containing protein. (853 aa)
I1NLM0_ORYGLDNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (417 aa)
Your Current Organism:
Oryza glaberrima
NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.
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