(23 nodes) S-phase kinase-associated protein 1 network (Oryza glaberrima)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I1Q809_ORYGL	Uncharacterized protein; Belongs to the SKP1 family. (171 aa)
	I1Q811_ORYGL	Uncharacterized protein; Belongs to the SKP1 family. (165 aa)
	I1QA24_ORYGL	Uncharacterized protein; Belongs to the SKP1 family. (187 aa)
	I1QCC5_ORYGL	Uncharacterized protein; Belongs to the SKP1 family. (195 aa)
	I1QCC9_ORYGL	Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (221 aa)
	I1QCD0_ORYGL	Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (261 aa)
	I1QCD2_ORYGL	Uncharacterized protein; Belongs to the SKP1 family. (174 aa)
	I1QCD3_ORYGL	Uncharacterized protein; Belongs to the SKP1 family. (178 aa)
	I1QCD4_ORYGL	Uncharacterized protein; Belongs to the SKP1 family. (230 aa)
	I1QI68_ORYGL	Uncharacterized protein; Belongs to the SKP1 family. (169 aa)
	I1QMJ6_ORYGL	Uncharacterized protein; Belongs to the SKP1 family. (160 aa)
	I1QQU3_ORYGL	Uncharacterized protein; Belongs to the SKP1 family. (175 aa)
	I1QRQ8_ORYGL	Skp1 domain-containing protein. (87 aa)
	I1QRQ9_ORYGL	Uncharacterized protein; Belongs to the SKP1 family. (166 aa)
	I1QRR0_ORYGL	Uncharacterized protein; Belongs to the SKP1 family. (165 aa)
	I1QRR5_ORYGL	Uncharacterized protein; Belongs to the SKP1 family. (165 aa)
	I1Q808_ORYGL	Uncharacterized protein; Belongs to the SKP1 family. (153 aa)
	I1PYW9_ORYGL	Uncharacterized protein; Belongs to the SKP1 family. (166 aa)
	I1PYW8_ORYGL	Skp1 domain-containing protein; Belongs to the SKP1 family. (143 aa)
	I1NYM7_ORYGL	Skp1 domain-containing protein. (196 aa)
	I1NWA4_ORYGL	Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (101 aa)
	I1QZZ8_ORYGL	Uncharacterized protein; Belongs to the SKP1 family. (173 aa)
	I1QUV6_ORYGL	Uncharacterized protein; Belongs to the SKP1 family. (220 aa)

Your Current Organism:

Oryza glaberrima

NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I1NYM7_ORYGL	I1QCC9_ORYGL	I1NYM7	I1QCC9	Skp1 domain-containing protein.	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	0.486
I1QA24_ORYGL	I1QCC9_ORYGL	I1QA24	I1QCC9	Uncharacterized protein; Belongs to the SKP1 family.	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	0.524
I1QCC9_ORYGL	I1NYM7_ORYGL	I1QCC9	I1NYM7	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	Skp1 domain-containing protein.	0.486
I1QCC9_ORYGL	I1QA24_ORYGL	I1QCC9	I1QA24	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	Uncharacterized protein; Belongs to the SKP1 family.	0.524
I1QCC9_ORYGL	I1QRQ8_ORYGL	I1QCC9	I1QRQ8	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	Skp1 domain-containing protein.	0.491
I1QRQ8_ORYGL	I1QCC9_ORYGL	I1QRQ8	I1QCC9	Skp1 domain-containing protein.	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	0.491