5 items (Oryza glaberrima) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I1R6Z2_ORYGL	Uncharacterized protein. (304 aa)
	I1QME8_ORYGL	ATP-synt_ab_N domain-containing protein. (112 aa)
	I1Q4C4_ORYGL	Uncharacterized protein. (620 aa)
	I1NXR6_ORYGL	Uncharacterized protein. (621 aa)
	OrsajCp022	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. (507 aa)

Your Current Organism:

Oryza glaberrima

NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I1NXR6_ORYGL	I1Q4C4_ORYGL	I1NXR6	I1Q4C4	Uncharacterized protein.	Uncharacterized protein.	0.950
I1NXR6_ORYGL	I1QME8_ORYGL	I1NXR6	I1QME8	Uncharacterized protein.	ATP-synt_ab_N domain-containing protein.	0.803
I1NXR6_ORYGL	OrsajCp022	I1NXR6	I1Q643	Uncharacterized protein.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.868
I1Q4C4_ORYGL	I1NXR6_ORYGL	I1Q4C4	I1NXR6	Uncharacterized protein.	Uncharacterized protein.	0.950
I1Q4C4_ORYGL	I1QME8_ORYGL	I1Q4C4	I1QME8	Uncharacterized protein.	ATP-synt_ab_N domain-containing protein.	0.803
I1Q4C4_ORYGL	OrsajCp022	I1Q4C4	I1Q643	Uncharacterized protein.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.868
I1QME8_ORYGL	I1NXR6_ORYGL	I1QME8	I1NXR6	ATP-synt_ab_N domain-containing protein.	Uncharacterized protein.	0.803
I1QME8_ORYGL	I1Q4C4_ORYGL	I1QME8	I1Q4C4	ATP-synt_ab_N domain-containing protein.	Uncharacterized protein.	0.803
OrsajCp022	I1NXR6_ORYGL	I1Q643	I1NXR6	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.868
OrsajCp022	I1Q4C4_ORYGL	I1Q643	I1Q4C4	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.868