15 items (Oryza glaberrima) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I1QA10_ORYGL	DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. (463 aa)
	I1NNK8_ORYGL	Uncharacterized protein. (1183 aa)
	I1Q379_ORYGL	Serine/threonine-protein phosphatase. (306 aa)
	I1Q1S2_ORYGL	Uncharacterized protein. (902 aa)
	I1PUT3_ORYGL	DNA primase; Belongs to the eukaryotic-type primase small subunit family. (364 aa)
	I1PUT2_ORYGL	Uncharacterized protein. (92 aa)
	I1PGH2_ORYGL	Serine/threonine-protein phosphatase. (307 aa)
	I1P7Y5_ORYGL	Serine/threonine-protein phosphatase. (329 aa)
	I1NY42_ORYGL	Uncharacterized protein. (554 aa)
	I1NTQ3_ORYGL	DNA polymerase. (1121 aa)
	I1R578_ORYGL	DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (625 aa)
	I1R2I1_ORYGL	Uncharacterized protein. (1181 aa)
	I1QUE7_ORYGL	Serine/threonine-protein phosphatase. (314 aa)
	I1QMA6_ORYGL	Uncharacterized protein. (587 aa)
	I1QDB6_ORYGL	Uncharacterized protein. (488 aa)

Your Current Organism:

Oryza glaberrima

NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I1NNK8_ORYGL	I1NY42_ORYGL	I1NNK8	I1NY42	Uncharacterized protein.	Uncharacterized protein.	0.904
I1NNK8_ORYGL	I1P7Y5_ORYGL	I1NNK8	I1P7Y5	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.916
I1NNK8_ORYGL	I1PGH2_ORYGL	I1NNK8	I1PGH2	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.916
I1NNK8_ORYGL	I1Q379_ORYGL	I1NNK8	I1Q379	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.916
I1NNK8_ORYGL	I1QDB6_ORYGL	I1NNK8	I1QDB6	Uncharacterized protein.	Uncharacterized protein.	0.904
I1NNK8_ORYGL	I1QUE7_ORYGL	I1NNK8	I1QUE7	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.916
I1NTQ3_ORYGL	I1PUT2_ORYGL	I1NTQ3	I1PUT2	DNA polymerase.	Uncharacterized protein.	0.998
I1NTQ3_ORYGL	I1PUT3_ORYGL	I1NTQ3	I1PUT3	DNA polymerase.	DNA primase; Belongs to the eukaryotic-type primase small subunit family.	0.998
I1NTQ3_ORYGL	I1QA10_ORYGL	I1NTQ3	I1QA10	DNA polymerase.	DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family.	0.999
I1NTQ3_ORYGL	I1R578_ORYGL	I1NTQ3	I1R578	DNA polymerase.	DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis.	0.999
I1NY42_ORYGL	I1NNK8_ORYGL	I1NY42	I1NNK8	Uncharacterized protein.	Uncharacterized protein.	0.904
I1NY42_ORYGL	I1P7Y5_ORYGL	I1NY42	I1P7Y5	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.969
I1NY42_ORYGL	I1PGH2_ORYGL	I1NY42	I1PGH2	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.929
I1NY42_ORYGL	I1Q1S2_ORYGL	I1NY42	I1Q1S2	Uncharacterized protein.	Uncharacterized protein.	0.904
I1NY42_ORYGL	I1Q379_ORYGL	I1NY42	I1Q379	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.969
I1NY42_ORYGL	I1QDB6_ORYGL	I1NY42	I1QDB6	Uncharacterized protein.	Uncharacterized protein.	0.882
I1NY42_ORYGL	I1QMA6_ORYGL	I1NY42	I1QMA6	Uncharacterized protein.	Uncharacterized protein.	0.964
I1NY42_ORYGL	I1QUE7_ORYGL	I1NY42	I1QUE7	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.969
I1NY42_ORYGL	I1R2I1_ORYGL	I1NY42	I1R2I1	Uncharacterized protein.	Uncharacterized protein.	0.904
I1P7Y5_ORYGL	I1NNK8_ORYGL	I1P7Y5	I1NNK8	Serine/threonine-protein phosphatase.	Uncharacterized protein.	0.916