STRINGSTRING
I1QCL8_ORYGL I1QCL8_ORYGL I1Q9V9_ORYGL I1Q9V9_ORYGL I1NR52_ORYGL I1NR52_ORYGL I1QM85_ORYGL I1QM85_ORYGL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
I1QCL8_ORYGLTrafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi. (187 aa)
I1Q9V9_ORYGLUncharacterized protein. (175 aa)
I1NR52_ORYGLTrafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily. (194 aa)
I1QM85_ORYGLUncharacterized protein. (174 aa)
Your Current Organism:
Oryza glaberrima
NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.
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