(55 nodes) Phenylalanine metabolism network (Oryza glaberrima)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I1PJ57_ORYGL	Amidase domain-containing protein. (507 aa)
	I1PIV5_ORYGL	Amine oxidase. (743 aa)
	I1PIQ8_ORYGL	Amidase domain-containing protein. (434 aa)
	I1PIQ7_ORYGL	Amidase domain-containing protein. (434 aa)
	I1PEV7_ORYGL	TPR_REGION domain-containing protein. (586 aa)
	I1PAP3_ORYGL	Uncharacterized protein. (268 aa)
	I1P570_ORYGL	Aspartate aminotransferase. (458 aa)
	I1P4E0_ORYGL	TPR_REGION domain-containing protein. (613 aa)
	I1P2D9_ORYGL	Phenylalanine ammonia-lyase. (713 aa)
	I1P2D8_ORYGL	Phenylalanine ammonia-lyase. (713 aa)
	I1P2D7_ORYGL	Phenylalanine ammonia-lyase. (718 aa)
	I1P2D6_ORYGL	Phenylalanine ammonia-lyase. (701 aa)
	I1NZQ1_ORYGL	Aminotran_1_2 domain-containing protein. (494 aa)
	I1NZN7_ORYGL	Aminotran_1_2 domain-containing protein. (439 aa)
	I1NZN5_ORYGL	Aminotran_1_2 domain-containing protein. (430 aa)
	I1NZN4_ORYGL	Uncharacterized protein. (135 aa)
	I1NYU4_ORYGL	Aspartate aminotransferase. (432 aa)
	I1NXM0_ORYGL	4-hydroxyphenylpyruvate dioxygenase. (446 aa)
	I1NTS5_ORYGL	Aminotran_1_2 domain-containing protein. (458 aa)
	I1NSD7_ORYGL	Uncharacterized protein. (302 aa)
	I1NS04_ORYGL	Uncharacterized protein. (533 aa)
	I1NRT6_ORYGL	Aspartate aminotransferase. (460 aa)
	I1PVU8_ORYGL	Phenylalanine ammonia-lyase. (716 aa)
	I1PN28_ORYGL	Phenylalanine ammonia-lyase. (714 aa)
	I1PN26_ORYGL	Phenylalanine ammonia-lyase. (707 aa)
	I1PM84_ORYGL	Amine oxidase. (838 aa)
	I1R3B9_ORYGL	Uncharacterized protein. (121 aa)
	I1R690_ORYGL	Amine oxidase; Belongs to the copper/topaquinone oxidase family. (152 aa)
	I1R6S0_ORYGL	Phenylalanine ammonia-lyase. (680 aa)
	I1Q255_ORYGL	Amine oxidase. (698 aa)
	I1Q256_ORYGL	Amine oxidase. (595 aa)
	I1Q285_ORYGL	Aminotran_1_2 domain-containing protein. (441 aa)
	I1Q2X9_ORYGL	Aspartate aminotransferase. (589 aa)
	I1Q4Y1_ORYGL	Uncharacterized protein. (115 aa)
	I1Q5B4_ORYGL	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. (994 aa)
	I1Q5C3_ORYGL	Uncharacterized protein. (216 aa)
	I1QAA2_ORYGL	Uncharacterized protein. (500 aa)
	I1QEG3_ORYGL	Amine oxidase. (764 aa)
	I1QFJ4_ORYGL	Uncharacterized protein. (514 aa)
	I1QFJ6_ORYGL	Uncharacterized protein. (523 aa)
	I1QHD6_ORYGL	Uncharacterized protein. (298 aa)
	I1QKR5_ORYGL	Uncharacterized protein. (515 aa)
	I1QSP8_ORYGL	F-box domain-containing protein. (379 aa)
	I1QSP9_ORYGL	Amidase domain-containing protein. (545 aa)
	I1QT31_ORYGL	F-box domain-containing protein. (322 aa)
	I1QU12_ORYGL	Uncharacterized protein. (526 aa)
	I1QU98_ORYGL	Uncharacterized protein. (512 aa)
	I1QWP1_ORYGL	Uncharacterized protein. (525 aa)
	I1R0X2_ORYGL	Aminotran_1_2 domain-containing protein. (442 aa)
	I1PM13_ORYGL	Amine oxidase; Belongs to the copper/topaquinone oxidase family. (140 aa)
	I1PKC7_ORYGL	Amidase domain-containing protein. (99 aa)
	I1PJQ2_ORYGL	Amine oxidase; Belongs to the copper/topaquinone oxidase family. (683 aa)
	I1PJ62_ORYGL	Uncharacterized protein. (181 aa)
	I1PJ61_ORYGL	Amidase domain-containing protein. (511 aa)
	I1PJ59_ORYGL	Amidase domain-containing protein. (479 aa)

Your Current Organism:

Oryza glaberrima

NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I1NRT6_ORYGL	I1NS04_ORYGL	I1NRT6	I1NS04	Aspartate aminotransferase.	Uncharacterized protein.	0.779
I1NRT6_ORYGL	I1NTS5_ORYGL	I1NRT6	I1NTS5	Aspartate aminotransferase.	Aminotran_1_2 domain-containing protein.	0.948
I1NRT6_ORYGL	I1NXM0_ORYGL	I1NRT6	I1NXM0	Aspartate aminotransferase.	4-hydroxyphenylpyruvate dioxygenase.	0.948
I1NRT6_ORYGL	I1NYU4_ORYGL	I1NRT6	I1NYU4	Aspartate aminotransferase.	Aspartate aminotransferase.	0.929
I1NRT6_ORYGL	I1NZN4_ORYGL	I1NRT6	I1NZN4	Aspartate aminotransferase.	Uncharacterized protein.	0.837
I1NRT6_ORYGL	I1NZN5_ORYGL	I1NRT6	I1NZN5	Aspartate aminotransferase.	Aminotran_1_2 domain-containing protein.	0.906
I1NRT6_ORYGL	I1NZN7_ORYGL	I1NRT6	I1NZN7	Aspartate aminotransferase.	Aminotran_1_2 domain-containing protein.	0.869
I1NRT6_ORYGL	I1NZQ1_ORYGL	I1NRT6	I1NZQ1	Aspartate aminotransferase.	Aminotran_1_2 domain-containing protein.	0.907
I1NRT6_ORYGL	I1P2D6_ORYGL	I1NRT6	I1P2D6	Aspartate aminotransferase.	Phenylalanine ammonia-lyase.	0.927
I1NRT6_ORYGL	I1P2D7_ORYGL	I1NRT6	I1P2D7	Aspartate aminotransferase.	Phenylalanine ammonia-lyase.	0.868
I1NRT6_ORYGL	I1P2D8_ORYGL	I1NRT6	I1P2D8	Aspartate aminotransferase.	Phenylalanine ammonia-lyase.	0.795
I1NRT6_ORYGL	I1P2D9_ORYGL	I1NRT6	I1P2D9	Aspartate aminotransferase.	Phenylalanine ammonia-lyase.	0.795
I1NRT6_ORYGL	I1P570_ORYGL	I1NRT6	I1P570	Aspartate aminotransferase.	Aspartate aminotransferase.	0.928
I1NRT6_ORYGL	I1PEV7_ORYGL	I1NRT6	I1PEV7	Aspartate aminotransferase.	TPR_REGION domain-containing protein.	0.539
I1NRT6_ORYGL	I1PIV5_ORYGL	I1NRT6	I1PIV5	Aspartate aminotransferase.	Amine oxidase.	0.860
I1NRT6_ORYGL	I1PJQ2_ORYGL	I1NRT6	I1PJQ2	Aspartate aminotransferase.	Amine oxidase; Belongs to the copper/topaquinone oxidase family.	0.865
I1NRT6_ORYGL	I1PM13_ORYGL	I1NRT6	I1PM13	Aspartate aminotransferase.	Amine oxidase; Belongs to the copper/topaquinone oxidase family.	0.860
I1NRT6_ORYGL	I1PM84_ORYGL	I1NRT6	I1PM84	Aspartate aminotransferase.	Amine oxidase.	0.865
I1NRT6_ORYGL	I1PN26_ORYGL	I1NRT6	I1PN26	Aspartate aminotransferase.	Phenylalanine ammonia-lyase.	0.852
I1NRT6_ORYGL	I1PN28_ORYGL	I1NRT6	I1PN28	Aspartate aminotransferase.	Phenylalanine ammonia-lyase.	0.849