(66 nodes) Various types of N-glycan biosynthesis network (Oryza glaberrima)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I1R7U2_ORYGL	Galectin domain-containing protein. (660 aa)
	I1NKN8_ORYGL	Uncharacterized protein. (416 aa)
	I1NMR6_ORYGL	Galectin domain-containing protein. (600 aa)
	I1NU59_ORYGL	Beta-hexosaminidase. (526 aa)
	I1NUJ2_ORYGL	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...] (698 aa)
	I1P0A3_ORYGL	Glyco_tran_28_C domain-containing protein. (172 aa)
	I1P0X9_ORYGL	Uncharacterized protein. (480 aa)
	I1P147_ORYGL	Uncharacterized protein. (258 aa)
	I1P1N5_ORYGL	Uncharacterized protein. (176 aa)
	I1P2G5_ORYGL	HMA domain-containing protein. (119 aa)
	I1P2G6_ORYGL	HMA domain-containing protein. (120 aa)
	I1P2G7_ORYGL	Uncharacterized protein. (108 aa)
	I1P2G8_ORYGL	Uncharacterized protein. (136 aa)
	I1P573_ORYGL	Uncharacterized protein. (442 aa)
	I1P5W7_ORYGL	Uncharacterized protein. (442 aa)
	I1P875_ORYGL	Glyco_trans_4-like_N domain-containing protein. (474 aa)
	I1P8G7_ORYGL	Uncharacterized protein. (148 aa)
	I1P8Z0_ORYGL	Glyco_hydro_20 domain-containing protein. (601 aa)
	I1PAG8_ORYGL	Uncharacterized protein. (448 aa)
	I1PAK9_ORYGL	Uncharacterized protein. (483 aa)
	I1PAL1_ORYGL	Uncharacterized protein. (449 aa)
	I1PCD4_ORYGL	Uncharacterized protein. (229 aa)
	I1PCT2_ORYGL	Uncharacterized protein. (336 aa)
	I1PEI1_ORYGL	Galectin domain-containing protein. (618 aa)
	I1PGF8_ORYGL	Galectin domain-containing protein. (651 aa)
	I1PGG0_ORYGL	Galectin domain-containing protein. (594 aa)
	I1PI53_ORYGL	Uncharacterized protein. (701 aa)
	I1PKS8_ORYGL	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the [...] (114 aa)
	I1PLD8_ORYGL	Uncharacterized protein. (456 aa)
	I1PM01_ORYGL	Uncharacterized protein. (119 aa)
	I1PM31_ORYGL	Uncharacterized protein. (229 aa)
	I1PM32_ORYGL	Uncharacterized protein. (239 aa)
	I1PM38_ORYGL	Uncharacterized protein. (130 aa)
	I1PM39_ORYGL	Uncharacterized protein. (141 aa)
	I1PM40_ORYGL	Uncharacterized protein. (132 aa)
	I1PNI9_ORYGL	Mannosyltransferase. (497 aa)
	I1PP74_ORYGL	Uncharacterized protein. (418 aa)
	I1PPI2_ORYGL	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (572 aa)
	I1PQV7_ORYGL	Uncharacterized protein. (721 aa)
	I1PRX1_ORYGL	Beta-hexosaminidase. (541 aa)
	I1PTA3_ORYGL	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (645 aa)
	I1PU76_ORYGL	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...] (615 aa)
	I1PVA2_ORYGL	Glyco_hydro_20 domain-containing protein. (162 aa)
	I1PVN4_ORYGL	Beta-hexosaminidase. (531 aa)
	I1PXC8_ORYGL	Uncharacterized protein. (787 aa)
	I1Q0W8_ORYGL	Galectin domain-containing protein. (637 aa)
	I1Q161_ORYGL	Alpha-mannosidase. (1184 aa)
	I1Q1U1_ORYGL	Uncharacterized protein. (320 aa)
	I1Q341_ORYGL	Glyco_trans_4-like_N domain-containing protein. (469 aa)
	I1Q5R0_ORYGL	Uncharacterized protein. (192 aa)
	I1Q8T0_ORYGL	Galectin domain-containing protein. (655 aa)
	I1Q8T2_ORYGL	Galectin domain-containing protein. (661 aa)
	I1Q905_ORYGL	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across t [...] (439 aa)
	I1QEJ0_ORYGL	Uncharacterized protein. (706 aa)
	I1QFE3_ORYGL	Galectin domain-containing protein. (643 aa)
	I1QK36_ORYGL	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (319 aa)
	I1QL15_ORYGL	Uncharacterized protein. (160 aa)
	I1R8Z7_ORYGL	Uncharacterized protein. (457 aa)
	I1QL19_ORYGL	Uncharacterized protein. (383 aa)
	I1QPU2_ORYGL	DUF2431 domain-containing protein. (352 aa)
	I1QPU3_ORYGL	DUF2431 domain-containing protein. (546 aa)
	I1QW69_ORYGL	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (320 aa)
	I1QW70_ORYGL	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (296 aa)
	I1R428_ORYGL	Uncharacterized protein. (463 aa)
	I1R4F1_ORYGL	Uncharacterized protein. (424 aa)
	I1R6M2_ORYGL	Hexosyltransferase; Belongs to the glycosyltransferase 31 family. (100 aa)

Your Current Organism:

Oryza glaberrima

NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I1NKN8_ORYGL	I1NU59_ORYGL	I1NKN8	I1NU59	Uncharacterized protein.	Beta-hexosaminidase.	0.634
I1NKN8_ORYGL	I1NUJ2_ORYGL	I1NKN8	I1NUJ2	Uncharacterized protein.	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...]	0.763
I1NKN8_ORYGL	I1P0A3_ORYGL	I1NKN8	I1P0A3	Uncharacterized protein.	Glyco_tran_28_C domain-containing protein.	0.525
I1NKN8_ORYGL	I1P147_ORYGL	I1NKN8	I1P147	Uncharacterized protein.	Uncharacterized protein.	0.634
I1NKN8_ORYGL	I1P573_ORYGL	I1NKN8	I1P573	Uncharacterized protein.	Uncharacterized protein.	0.483
I1NKN8_ORYGL	I1P5W7_ORYGL	I1NKN8	I1P5W7	Uncharacterized protein.	Uncharacterized protein.	0.499
I1NKN8_ORYGL	I1P875_ORYGL	I1NKN8	I1P875	Uncharacterized protein.	Glyco_trans_4-like_N domain-containing protein.	0.793
I1NKN8_ORYGL	I1P8Z0_ORYGL	I1NKN8	I1P8Z0	Uncharacterized protein.	Glyco_hydro_20 domain-containing protein.	0.634
I1NKN8_ORYGL	I1PCD4_ORYGL	I1NKN8	I1PCD4	Uncharacterized protein.	Uncharacterized protein.	0.528
I1NKN8_ORYGL	I1PCT2_ORYGL	I1NKN8	I1PCT2	Uncharacterized protein.	Uncharacterized protein.	0.860
I1NKN8_ORYGL	I1PI53_ORYGL	I1NKN8	I1PI53	Uncharacterized protein.	Uncharacterized protein.	0.732
I1NKN8_ORYGL	I1PNI9_ORYGL	I1NKN8	I1PNI9	Uncharacterized protein.	Mannosyltransferase.	0.988
I1NKN8_ORYGL	I1PP74_ORYGL	I1NKN8	I1PP74	Uncharacterized protein.	Uncharacterized protein.	0.714
I1NKN8_ORYGL	I1PPI2_ORYGL	I1NKN8	I1PPI2	Uncharacterized protein.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.442
I1NKN8_ORYGL	I1PQV7_ORYGL	I1NKN8	I1PQV7	Uncharacterized protein.	Uncharacterized protein.	0.732
I1NKN8_ORYGL	I1PRX1_ORYGL	I1NKN8	I1PRX1	Uncharacterized protein.	Beta-hexosaminidase.	0.664
I1NKN8_ORYGL	I1PTA3_ORYGL	I1NKN8	I1PTA3	Uncharacterized protein.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.512
I1NKN8_ORYGL	I1PU76_ORYGL	I1NKN8	I1PU76	Uncharacterized protein.	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...]	0.852
I1NKN8_ORYGL	I1PVA2_ORYGL	I1NKN8	I1PVA2	Uncharacterized protein.	Glyco_hydro_20 domain-containing protein.	0.634
I1NKN8_ORYGL	I1PVN4_ORYGL	I1NKN8	I1PVN4	Uncharacterized protein.	Beta-hexosaminidase.	0.634