33 items (Oryza glaberrima) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Your Input:
	I1R5U9_ORYGL	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (531 aa)
	I1R4D3_ORYGL	Uncharacterized protein. (350 aa)
	I1R145_ORYGL	TIR domain-containing protein. (849 aa)
	I1R077_ORYGL	Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family. (521 aa)
	I1QZZ4_ORYGL	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (471 aa)
	I1QXR2_ORYGL	Uncharacterized protein. (133 aa)
	I1QSJ7_ORYGL	Queuine tRNA-ribosyltransferase accessory subunit 2; Non-catalytic subunit of the queuine tRNA-ribosyltransferase (TGT) that catalyzes the base-exchange of a guanine (G) residue with queuine (Q) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine); Belongs to the queuine tRNA-ribosyltransferase family. QTRT2 subfamily. (396 aa)
	I1QPP5_ORYGL	Queuine tRNA-ribosyltransferase catalytic subunit 1; Catalytic subunit of the queuine tRNA-ribosyltransferase (TGT) that catalyzes the base-exchange of a guanine (G) residue with queuine (Q) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, formi [...] (416 aa)
	I1QMY9_ORYGL	Uncharacterized protein. (394 aa)
	I1QJW5_ORYGL	Formyl_trans_N domain-containing protein. (288 aa)
	I1QI40_ORYGL	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (589 aa)
	I1QGI8_ORYGL	MGS domain-containing protein. (602 aa)
	I1QEL4_ORYGL	5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. (282 aa)
	I1QB70_ORYGL	Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (185 aa)
	I1Q8P6_ORYGL	Uncharacterized protein. (222 aa)
	I1Q8E1_ORYGL	HNHc domain-containing protein. (282 aa)
	I1Q2I7_ORYGL	Formyl_trans_N domain-containing protein. (206 aa)
	I1PUE7_ORYGL	Rhodanese domain-containing protein. (462 aa)
	I1PTX4_ORYGL	Formyl_trans_N domain-containing protein. (234 aa)
	I1PSI2_ORYGL	Uncharacterized protein. (292 aa)
	I1PQ18_ORYGL	Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. (410 aa)
	I1PLQ9_ORYGL	FSH1 domain-containing protein. (245 aa)
	I1PHN5_ORYGL	Rhodanese domain-containing protein. (408 aa)
	I1PHE9_ORYGL	Uncharacterized protein. (214 aa)
	I1PFA0_ORYGL	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (509 aa)
	I1P6L2_ORYGL	Formyl_trans_N domain-containing protein. (304 aa)
	I1NWN9_ORYGL	Uncharacterized protein. (373 aa)
	I1NTV1_ORYGL	SHMT domain-containing protein. (600 aa)
	I1NRT5_ORYGL	AAA domain-containing protein. (1002 aa)
	I1NQS3_ORYGL	Uncharacterized protein. (359 aa)
	I1R8J6_ORYGL	Uncharacterized protein. (226 aa)
	I1R791_ORYGL	Rhodanese domain-containing protein. (625 aa)
	I1R663_ORYGL	Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family. (494 aa)

Your Current Organism:

Oryza glaberrima

NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I1NQS3_ORYGL	I1NTV1_ORYGL	I1NQS3	I1NTV1	Uncharacterized protein.	SHMT domain-containing protein.	0.954
I1NQS3_ORYGL	I1NWN9_ORYGL	I1NQS3	I1NWN9	Uncharacterized protein.	Uncharacterized protein.	0.924
I1NQS3_ORYGL	I1P6L2_ORYGL	I1NQS3	I1P6L2	Uncharacterized protein.	Formyl_trans_N domain-containing protein.	0.883
I1NQS3_ORYGL	I1PFA0_ORYGL	I1NQS3	I1PFA0	Uncharacterized protein.	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.954
I1NQS3_ORYGL	I1PHE9_ORYGL	I1NQS3	I1PHE9	Uncharacterized protein.	Uncharacterized protein.	0.924
I1NQS3_ORYGL	I1PQ18_ORYGL	I1NQS3	I1PQ18	Uncharacterized protein.	Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.	0.960
I1NQS3_ORYGL	I1PSI2_ORYGL	I1NQS3	I1PSI2	Uncharacterized protein.	Uncharacterized protein.	0.924
I1NQS3_ORYGL	I1PTX4_ORYGL	I1NQS3	I1PTX4	Uncharacterized protein.	Formyl_trans_N domain-containing protein.	0.915
I1NQS3_ORYGL	I1Q2I7_ORYGL	I1NQS3	I1Q2I7	Uncharacterized protein.	Formyl_trans_N domain-containing protein.	0.928
I1NQS3_ORYGL	I1Q8E1_ORYGL	I1NQS3	I1Q8E1	Uncharacterized protein.	HNHc domain-containing protein.	0.870
I1NQS3_ORYGL	I1Q8P6_ORYGL	I1NQS3	I1Q8P6	Uncharacterized protein.	Uncharacterized protein.	0.924
I1NQS3_ORYGL	I1QEL4_ORYGL	I1NQS3	I1QEL4	Uncharacterized protein.	5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.	0.919
I1NQS3_ORYGL	I1QGI8_ORYGL	I1NQS3	I1QGI8	Uncharacterized protein.	MGS domain-containing protein.	0.941
I1NQS3_ORYGL	I1QI40_ORYGL	I1NQS3	I1QI40	Uncharacterized protein.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.951
I1NQS3_ORYGL	I1QJW5_ORYGL	I1NQS3	I1QJW5	Uncharacterized protein.	Formyl_trans_N domain-containing protein.	0.915
I1NQS3_ORYGL	I1QMY9_ORYGL	I1NQS3	I1QMY9	Uncharacterized protein.	Uncharacterized protein.	0.924
I1NQS3_ORYGL	I1QZZ4_ORYGL	I1NQS3	I1QZZ4	Uncharacterized protein.	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.954
I1NQS3_ORYGL	I1R077_ORYGL	I1NQS3	I1R077	Uncharacterized protein.	Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.	0.992
I1NQS3_ORYGL	I1R4D3_ORYGL	I1NQS3	I1R4D3	Uncharacterized protein.	Uncharacterized protein.	0.919
I1NQS3_ORYGL	I1R5U9_ORYGL	I1NQS3	I1R5U9	Uncharacterized protein.	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.954