10 items (Panicum miliaceum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A3L6PC15	GDP-L-fucose synthase 1. (361 aa)
	A0A3L6PCS8	Putative GDP-L-fucose synthase 2. (339 aa)
	A0A3L6PG17	GDP-mannose 4,6 dehydratase 1-like. (370 aa)
	A0A3L6QWM9	DUF295 domain-containing protein. (832 aa)
	A0A3L6S076	GDP-mannose 4,6 dehydratase 1-like. (370 aa)
	A0A3L6S1B2	Putative GDP-L-fucose synthase 2. (336 aa)
	A0A3L6S235	GDP-L-fucose synthase 1. (464 aa)
	A0A3L6SNU7	Putative mannose-1-phosphate guanylyltransferase 3. (361 aa)
	A0A3L6SQW0	Uncharacterized protein. (328 aa)
	A0A3L6TGL8	NTP_transferase domain-containing protein. (346 aa)

Your Current Organism:

Panicum miliaceum

NCBI taxonomy Id: 4540
Other names: P. miliaceum, Panicum miliaceum L., broom millet, common millet, proso millet

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A3L6PC15	A0A3L6PCS8	GDP-L-fucose synthase 1.	Putative GDP-L-fucose synthase 2.	0.895
A0A3L6PC15	A0A3L6PG17	GDP-L-fucose synthase 1.	GDP-mannose 4,6 dehydratase 1-like.	0.981
A0A3L6PC15	A0A3L6QWM9	GDP-L-fucose synthase 1.	DUF295 domain-containing protein.	0.662
A0A3L6PC15	A0A3L6S076	GDP-L-fucose synthase 1.	GDP-mannose 4,6 dehydratase 1-like.	0.981
A0A3L6PC15	A0A3L6S1B2	GDP-L-fucose synthase 1.	Putative GDP-L-fucose synthase 2.	0.895
A0A3L6PC15	A0A3L6SNU7	GDP-L-fucose synthase 1.	Putative mannose-1-phosphate guanylyltransferase 3.	0.712
A0A3L6PC15	A0A3L6SQW0	GDP-L-fucose synthase 1.	Uncharacterized protein.	0.662
A0A3L6PC15	A0A3L6TGL8	GDP-L-fucose synthase 1.	NTP_transferase domain-containing protein.	0.712
A0A3L6PCS8	A0A3L6PC15	Putative GDP-L-fucose synthase 2.	GDP-L-fucose synthase 1.	0.895
A0A3L6PCS8	A0A3L6PG17	Putative GDP-L-fucose synthase 2.	GDP-mannose 4,6 dehydratase 1-like.	0.980
A0A3L6PCS8	A0A3L6QWM9	Putative GDP-L-fucose synthase 2.	DUF295 domain-containing protein.	0.662
A0A3L6PCS8	A0A3L6S076	Putative GDP-L-fucose synthase 2.	GDP-mannose 4,6 dehydratase 1-like.	0.980
A0A3L6PCS8	A0A3L6S235	Putative GDP-L-fucose synthase 2.	GDP-L-fucose synthase 1.	0.895
A0A3L6PCS8	A0A3L6SNU7	Putative GDP-L-fucose synthase 2.	Putative mannose-1-phosphate guanylyltransferase 3.	0.712
A0A3L6PCS8	A0A3L6SQW0	Putative GDP-L-fucose synthase 2.	Uncharacterized protein.	0.662
A0A3L6PCS8	A0A3L6TGL8	Putative GDP-L-fucose synthase 2.	NTP_transferase domain-containing protein.	0.712
A0A3L6PG17	A0A3L6PC15	GDP-mannose 4,6 dehydratase 1-like.	GDP-L-fucose synthase 1.	0.981
A0A3L6PG17	A0A3L6PCS8	GDP-mannose 4,6 dehydratase 1-like.	Putative GDP-L-fucose synthase 2.	0.980
A0A3L6PG17	A0A3L6QWM9	GDP-mannose 4,6 dehydratase 1-like.	DUF295 domain-containing protein.	0.617
A0A3L6PG17	A0A3L6S1B2	GDP-mannose 4,6 dehydratase 1-like.	Putative GDP-L-fucose synthase 2.	0.980