20 items (Panicum miliaceum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A3L6PLG6	E3 ubiquitin-protein ligase UPL5-like. (362 aa)
	A0A3L6PNU0	E3 ubiquitin-protein ligase UPL5-like. (360 aa)
	A0A3L6PRC0	E3 ubiquitin-protein ligase UPL5-like. (362 aa)
	A0A3L6QC92	E3 ubiquitin-protein ligase UPL3-like. (1848 aa)
	A0A3L6QP82	E3 ubiquitin-protein ligase UPL5. (868 aa)
	A0A3L6R6J6	E3 ubiquitin-protein ligase UPL4. (1274 aa)
	A0A3L6R7M1	E3 ubiquitin-protein ligase UPL6. (1028 aa)
	A0A3L6RCW7	E3 ubiquitin-protein ligase UPL1-like isoform X2. (3107 aa)
	A0A3L6REP1	E3 ubiquitin-protein ligase UPL5-like. (361 aa)
	A0A3L6REQ0	HECT domain-containing protein. (1254 aa)
	A0A3L6RHX1	E3 ubiquitin-protein ligase UPL5-like. (311 aa)
	A0A3L6RMT1	E3 ubiquitin-protein ligase UPL5-like. (347 aa)
	A0A3L6S7G1	E3 ubiquitin-protein ligase UPL7. (1158 aa)
	A0A3L6SV76	E3 ubiquitin-protein ligase UPL6. (1180 aa)
	A0A3L6SZV3	E3 ubiquitin-protein ligase UPL4. (1180 aa)
	A0A3L6T246	E3 ubiquitin-protein ligase UPL1-like protein. (2574 aa)
	A0A3L6T4W0	HECT domain-containing protein. (1365 aa)
	A0A3L6T9Q8	E3 ubiquitin-protein ligase UPL5. (872 aa)
	A0A3L6TD76	E3 ubiquitin-protein ligase UPL1-like. (3698 aa)
	A0A3L6TRV5	E3 ubiquitin-protein ligase UPL7. (1156 aa)

Your Current Organism:

Panicum miliaceum

NCBI taxonomy Id: 4540
Other names: P. miliaceum, Panicum miliaceum L., broom millet, common millet, proso millet

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A3L6PLG6	A0A3L6QC92	E3 ubiquitin-protein ligase UPL5-like.	E3 ubiquitin-protein ligase UPL3-like.	0.571
A0A3L6PLG6	A0A3L6R6J6	E3 ubiquitin-protein ligase UPL5-like.	E3 ubiquitin-protein ligase UPL4.	0.709
A0A3L6PLG6	A0A3L6REQ0	E3 ubiquitin-protein ligase UPL5-like.	HECT domain-containing protein.	0.709
A0A3L6PLG6	A0A3L6SZV3	E3 ubiquitin-protein ligase UPL5-like.	E3 ubiquitin-protein ligase UPL4.	0.709
A0A3L6PLG6	A0A3L6T4W0	E3 ubiquitin-protein ligase UPL5-like.	HECT domain-containing protein.	0.709
A0A3L6PNU0	A0A3L6QC92	E3 ubiquitin-protein ligase UPL5-like.	E3 ubiquitin-protein ligase UPL3-like.	0.571
A0A3L6PNU0	A0A3L6R6J6	E3 ubiquitin-protein ligase UPL5-like.	E3 ubiquitin-protein ligase UPL4.	0.709
A0A3L6PNU0	A0A3L6REQ0	E3 ubiquitin-protein ligase UPL5-like.	HECT domain-containing protein.	0.709
A0A3L6PNU0	A0A3L6SZV3	E3 ubiquitin-protein ligase UPL5-like.	E3 ubiquitin-protein ligase UPL4.	0.709
A0A3L6PNU0	A0A3L6T4W0	E3 ubiquitin-protein ligase UPL5-like.	HECT domain-containing protein.	0.709
A0A3L6PRC0	A0A3L6QC92	E3 ubiquitin-protein ligase UPL5-like.	E3 ubiquitin-protein ligase UPL3-like.	0.571
A0A3L6PRC0	A0A3L6R6J6	E3 ubiquitin-protein ligase UPL5-like.	E3 ubiquitin-protein ligase UPL4.	0.709
A0A3L6PRC0	A0A3L6REQ0	E3 ubiquitin-protein ligase UPL5-like.	HECT domain-containing protein.	0.709
A0A3L6PRC0	A0A3L6SZV3	E3 ubiquitin-protein ligase UPL5-like.	E3 ubiquitin-protein ligase UPL4.	0.709
A0A3L6PRC0	A0A3L6T4W0	E3 ubiquitin-protein ligase UPL5-like.	HECT domain-containing protein.	0.709
A0A3L6QC92	A0A3L6PLG6	E3 ubiquitin-protein ligase UPL3-like.	E3 ubiquitin-protein ligase UPL5-like.	0.571
A0A3L6QC92	A0A3L6PNU0	E3 ubiquitin-protein ligase UPL3-like.	E3 ubiquitin-protein ligase UPL5-like.	0.571
A0A3L6QC92	A0A3L6PRC0	E3 ubiquitin-protein ligase UPL3-like.	E3 ubiquitin-protein ligase UPL5-like.	0.571
A0A3L6QC92	A0A3L6QP82	E3 ubiquitin-protein ligase UPL3-like.	E3 ubiquitin-protein ligase UPL5.	0.571
A0A3L6QC92	A0A3L6R6J6	E3 ubiquitin-protein ligase UPL3-like.	E3 ubiquitin-protein ligase UPL4.	0.999