STRINGSTRING
ASPCAL13105 ASPCAL13105 ASPCAL01155 ASPCAL01155 ASPCAL01755 ASPCAL01755 ASPCAL08851 ASPCAL08851 ASPCAL08499 ASPCAL08499 ASPCAL09543 ASPCAL09543
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ASPCAL13105Putative 60S ribosomal protein L39. (51 aa)
ASPCAL01155Putative 60S ribosomal protein L28 (AFU_orthologue AFUA_6G05200). (157 aa)
ASPCAL01755Putative 60S ribosomal protein L31e (AFU_orthologue AFUA_6G13250). (174 aa)
ASPCAL08851Putative 60S ribosomal protein L35. (124 aa)
ASPCAL08499Putative 60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family. (80 aa)
ASPCAL09543Putative 60S ribosomal protein L17 (AFU_orthologue AFUA_1G14410); Belongs to the universal ribosomal protein uL22 family. (185 aa)
Your Current Organism:
Aspergillus calidoustus
NCBI taxonomy Id: 454130
Other names: A. calidoustus, Aspergillus calidoustus Varga, Houbraken & Samson 2008, Aspergillus sp. JV-2007c, CBS 121601
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