(42 nodes) Spliceosomal complex network (Coccidioides immitis RMSCC3703)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CISG_09454	Pre-mRNA-splicing factor cwc24. (335 aa)
	CISG_09963	Pre-mRNA-splicing factor cwc26. (344 aa)
	CISG_09909	Pre-mRNA-splicing factor prp46. (450 aa)
	CISG_03326	Cell cycle control protein cwf14. (148 aa)
	CISG_03357	Peptidyl-prolyl isomerase cwc27. (560 aa)
	CISG_03434	Cell cycle control protein cwf16. (273 aa)
	CISG_03579	Uncharacterized protein. (198 aa)
	CISG_09674	Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16. (308 aa)
	CISG_03593	ATP-dependent RNA helicase hrpA. (317 aa)
	CISG_00838	U2 snRNP component IST3. (269 aa)
	CISG_00829	Pre-mRNA-splicing factor isy1. (249 aa)
	CISG_04057	Ubiquitin-protein ligase E4. (208 aa)
	CISG_05519	Pre-mRNA-splicing factor cwc2. (413 aa)
	CISG_05674	Pre-mRNA-splicing factor CWC25. (168 aa)
	CISG_05748	PWI domain-containing protein. (378 aa)
	CISG_05673	Uncharacterized protein. (77 aa)
	CISG_07025	Pre-mRNA-splicing factor cwc15. (236 aa)
	CISG_07079	Pre-mRNA-splicing factor cef1. (539 aa)
	CISG_06982	Pre-mRNA-splicing factor cwc22. (493 aa)
	CISG_06303	Pre-mRNA-splicing factor slt11. (383 aa)
	CISG_01844	Pre-mRNA-splicing factor syf1. (852 aa)
	CISG_06586	DUF1716 domain-containing protein. (356 aa)
	CISG_07078	Pre-mRNA-splicing factor cef1. (239 aa)
	CISG_01908	Uncharacterized protein. (213 aa)
	CISG_08163	Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16. (986 aa)
	CISG_09144	Pre-mRNA-splicing factor clf1. (479 aa)
	CISG_02244	WD repeat-containing protein 5B. (573 aa)
	CISG_02464	Pre-mRNA-splicing factor syf2. (292 aa)
	CISG_02674	Pre-mRNA-splicing factor slu7. (468 aa)
	CISG_09603	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (141 aa)
	CISG_09673	Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16. (606 aa)
	CISG_03477	Pre-mRNA-processing protein 45. (473 aa)
	CISG_03497	PRP18 protein. (174 aa)
	CISG_04056	Ubiquitin-protein ligase E4. (89 aa)
	CISG_04071	Peptidyl-prolyl isomerase CWC27. (576 aa)
	CISG_04190	Uncharacterized protein. (1065 aa)
	CISG_05068	Uncharacterized protein. (229 aa)
	CISG_05989	Pre-mRNA-splicing factor CWC21. (314 aa)
	CISG_01603	Uncharacterized protein. (80 aa)
	CISG_07515	PPIL4 protein. (270 aa)
	CISG_08675	Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16. (1225 aa)
	CISG_08808	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (223 aa)

Your Current Organism:

Coccidioides immitis RMSCC3703

NCBI taxonomy Id: 454286
Other names: C. immitis RMSCC 3703, Coccidioides immitis RMSCC 3703

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CISG_00829	CISG_00838	A0A0J8QS40	A0A0J8QQN8	Pre-mRNA-splicing factor isy1.	U2 snRNP component IST3.	0.942
CISG_00829	CISG_01603	A0A0J8QS40	A0A0J8TVF1	Pre-mRNA-splicing factor isy1.	Uncharacterized protein.	0.997
CISG_00829	CISG_01844	A0A0J8QS40	A0A0J8R0X6	Pre-mRNA-splicing factor isy1.	Pre-mRNA-splicing factor syf1.	0.999
CISG_00829	CISG_01908	A0A0J8QS40	A0A0J8R4Z8	Pre-mRNA-splicing factor isy1.	Uncharacterized protein.	0.899
CISG_00829	CISG_02244	A0A0J8QS40	A0A0J8R9C6	Pre-mRNA-splicing factor isy1.	WD repeat-containing protein 5B.	0.986
CISG_00829	CISG_02464	A0A0J8QS40	A0A0J8R9L5	Pre-mRNA-splicing factor isy1.	Pre-mRNA-splicing factor syf2.	0.988
CISG_00829	CISG_02674	A0A0J8QS40	A0A0J8R9V7	Pre-mRNA-splicing factor isy1.	Pre-mRNA-splicing factor slu7.	0.830
CISG_00829	CISG_03326	A0A0J8QS40	A0A0J8QL17	Pre-mRNA-splicing factor isy1.	Cell cycle control protein cwf14.	0.999
CISG_00829	CISG_03357	A0A0J8QS40	A0A0J8QL26	Pre-mRNA-splicing factor isy1.	Peptidyl-prolyl isomerase cwc27.	0.810
CISG_00829	CISG_03434	A0A0J8QS40	A0A0J8QL98	Pre-mRNA-splicing factor isy1.	Cell cycle control protein cwf16.	0.955
CISG_00829	CISG_03477	A0A0J8QS40	A0A0J8THQ4	Pre-mRNA-splicing factor isy1.	Pre-mRNA-processing protein 45.	0.999
CISG_00829	CISG_03497	A0A0J8QS40	A0A0J8THR8	Pre-mRNA-splicing factor isy1.	PRP18 protein.	0.863
CISG_00829	CISG_03579	A0A0J8QS40	A0A0J8QM12	Pre-mRNA-splicing factor isy1.	Uncharacterized protein.	0.471
CISG_00829	CISG_03593	A0A0J8QS40	A0A0J8QQ25	Pre-mRNA-splicing factor isy1.	ATP-dependent RNA helicase hrpA.	0.703
CISG_00829	CISG_04056	A0A0J8QS40	A0A0J8TK88	Pre-mRNA-splicing factor isy1.	Ubiquitin-protein ligase E4.	0.962
CISG_00829	CISG_04057	A0A0J8QS40	A0A0J8QSB0	Pre-mRNA-splicing factor isy1.	Ubiquitin-protein ligase E4.	0.962
CISG_00829	CISG_04071	A0A0J8QS40	A0A0J8TKA2	Pre-mRNA-splicing factor isy1.	Peptidyl-prolyl isomerase CWC27.	0.710
CISG_00829	CISG_04190	A0A0J8QS40	A0A0J8TNF4	Pre-mRNA-splicing factor isy1.	Uncharacterized protein.	0.998
CISG_00829	CISG_05068	A0A0J8QS40	A0A0J8TNX6	Pre-mRNA-splicing factor isy1.	Uncharacterized protein.	0.988
CISG_00829	CISG_05519	A0A0J8QS40	A0A0J8QUL5	Pre-mRNA-splicing factor isy1.	Pre-mRNA-splicing factor cwc2.	0.987