(12 nodes) Swr1 complex network (Setaria italica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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gene fusions

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Others

textmining

co-expression

protein homology

Your Input:
	A0A368PQF0	Uncharacterized protein. (2018 aa)
	A0A368QQA2	Uncharacterized protein. (250 aa)
	A0A368RD90	RuvB-like helicase; Belongs to the RuvB family. (501 aa)
	K3XHM1_SETIT	RuvB-like helicase; Belongs to the RuvB family. (455 aa)
	K3YIB2_SETIT	YL1_C domain-containing protein. (360 aa)
	K3YZU7_SETIT	HSA domain-containing protein. (255 aa)
	K3Z5V7_SETIT	SANT domain-containing protein. (477 aa)
	K3ZSW6_SETIT	RuvB-like helicase; Belongs to the RuvB family. (478 aa)
	K3ZSX6_SETIT	RuvB-like helicase; Belongs to the RuvB family. (475 aa)
	K4AA17_SETIT	Uncharacterized protein; Belongs to the actin family. (443 aa)
	K4AA36_SETIT	SANT domain-containing protein. (440 aa)
	K4AFV4_SETIT	HIT-type domain-containing protein. (173 aa)

Your Current Organism:

Setaria italica

NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A368PQF0	A0A368QQA2	A0A368PQF0	A0A368QQA2	Uncharacterized protein.	Uncharacterized protein.	0.762
A0A368PQF0	A0A368RD90	A0A368PQF0	A0A368RD90	Uncharacterized protein.	RuvB-like helicase; Belongs to the RuvB family.	0.967
A0A368PQF0	K3XHM1_SETIT	A0A368PQF0	K3XHM1	Uncharacterized protein.	RuvB-like helicase; Belongs to the RuvB family.	0.931
A0A368PQF0	K3YIB2_SETIT	A0A368PQF0	K3YIB2	Uncharacterized protein.	YL1_C domain-containing protein.	0.979
A0A368PQF0	K3Z5V7_SETIT	A0A368PQF0	K3Z5V7	Uncharacterized protein.	SANT domain-containing protein.	0.964
A0A368PQF0	K3ZSW6_SETIT	A0A368PQF0	K3ZSW6	Uncharacterized protein.	RuvB-like helicase; Belongs to the RuvB family.	0.964
A0A368PQF0	K3ZSX6_SETIT	A0A368PQF0	K3ZSX6	Uncharacterized protein.	RuvB-like helicase; Belongs to the RuvB family.	0.964
A0A368PQF0	K4AA17_SETIT	A0A368PQF0	K4AA17	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.958
A0A368PQF0	K4AA36_SETIT	A0A368PQF0	K4AA36	Uncharacterized protein.	SANT domain-containing protein.	0.964
A0A368PQF0	K4AFV4_SETIT	A0A368PQF0	K4AFV4	Uncharacterized protein.	HIT-type domain-containing protein.	0.971
A0A368QQA2	A0A368PQF0	A0A368QQA2	A0A368PQF0	Uncharacterized protein.	Uncharacterized protein.	0.762
A0A368QQA2	A0A368RD90	A0A368QQA2	A0A368RD90	Uncharacterized protein.	RuvB-like helicase; Belongs to the RuvB family.	0.931
A0A368QQA2	K3XHM1_SETIT	A0A368QQA2	K3XHM1	Uncharacterized protein.	RuvB-like helicase; Belongs to the RuvB family.	0.857
A0A368QQA2	K3YIB2_SETIT	A0A368QQA2	K3YIB2	Uncharacterized protein.	YL1_C domain-containing protein.	0.887
A0A368QQA2	K3YZU7_SETIT	A0A368QQA2	K3YZU7	Uncharacterized protein.	HSA domain-containing protein.	0.762
A0A368QQA2	K3Z5V7_SETIT	A0A368QQA2	K3Z5V7	Uncharacterized protein.	SANT domain-containing protein.	0.946
A0A368QQA2	K3ZSW6_SETIT	A0A368QQA2	K3ZSW6	Uncharacterized protein.	RuvB-like helicase; Belongs to the RuvB family.	0.909
A0A368QQA2	K3ZSX6_SETIT	A0A368QQA2	K3ZSX6	Uncharacterized protein.	RuvB-like helicase; Belongs to the RuvB family.	0.909
A0A368QQA2	K4AA17_SETIT	A0A368QQA2	K4AA17	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.940
A0A368QQA2	K4AA36_SETIT	A0A368QQA2	K4AA36	Uncharacterized protein.	SANT domain-containing protein.	0.946

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