(29 nodes) Mixed, incl. Response to silver ion, and Protein JINGUBANG-like network (Setaria italica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A368PZV7	WD_REPEATS_REGION domain-containing protein. (579 aa)
	A0A368Q8A7	WD_REPEATS_REGION domain-containing protein. (431 aa)
	A0A368R7F0	Uncharacterized protein. (881 aa)
	A0A368R7K7	WD_REPEATS_REGION domain-containing protein. (305 aa)
	A0A368R9K4	WD_REPEATS_REGION domain-containing protein. (888 aa)
	A0A368RVF6	WD_REPEATS_REGION domain-containing protein. (461 aa)
	A0A368SHC3	WD_REPEATS_REGION domain-containing protein. (488 aa)
	A0A368SX00	Uncharacterized protein. (369 aa)
	K3XEF1_SETIT	Uncharacterized protein. (868 aa)
	K3XEJ5_SETIT	WD_REPEATS_REGION domain-containing protein. (827 aa)
	K3XFA3_SETIT	WD_REPEATS_REGION domain-containing protein. (671 aa)
	K3XSE5_SETIT	WD_REPEATS_REGION domain-containing protein. (504 aa)
	K3XWC3_SETIT	WD_REPEATS_REGION domain-containing protein. (527 aa)
	K3XXA8_SETIT	Uncharacterized protein. (408 aa)
	K3Y5C8_SETIT	Uncharacterized protein. (778 aa)
	K3Y5N5_SETIT	WD_REPEATS_REGION domain-containing protein. (695 aa)
	K3Y5Q9_SETIT	Uncharacterized protein. (670 aa)
	K3YPZ9_SETIT	Uncharacterized protein. (804 aa)
	K3YQJ8_SETIT	WD_REPEATS_REGION domain-containing protein. (681 aa)
	K3YSM8_SETIT	Uncharacterized protein. (428 aa)
	K3YSV1_SETIT	Uncharacterized protein. (416 aa)
	K3Z3Z1_SETIT	Uncharacterized protein. (796 aa)
	K3ZCP1_SETIT	WD_REPEATS_REGION domain-containing protein. (525 aa)
	K3ZU94_SETIT	WD_REPEATS_REGION domain-containing protein. (380 aa)
	K4A692_SETIT	Uncharacterized protein. (746 aa)
	K4A6D9_SETIT	Uncharacterized protein. (722 aa)
	K4A9Z5_SETIT	Uncharacterized protein. (445 aa)
	K4AJ29_SETIT	WD_REPEATS_REGION domain-containing protein. (490 aa)
	K4AKC3_SETIT	Uncharacterized protein. (413 aa)

Your Current Organism:

Setaria italica

NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A368PZV7	A0A368R7F0	A0A368PZV7	A0A368R7F0	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.408
A0A368PZV7	A0A368R7K7	A0A368PZV7	A0A368R7K7	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.487
A0A368PZV7	A0A368RVF6	A0A368PZV7	A0A368RVF6	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.527
A0A368PZV7	A0A368SHC3	A0A368PZV7	A0A368SHC3	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.508
A0A368PZV7	A0A368SX00	A0A368PZV7	A0A368SX00	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.492
A0A368PZV7	K3XEF1_SETIT	A0A368PZV7	K3XEF1	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.437
A0A368PZV7	K3XFA3_SETIT	A0A368PZV7	K3XFA3	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.463
A0A368PZV7	K3XSE5_SETIT	A0A368PZV7	K3XSE5	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.472
A0A368PZV7	K3XWC3_SETIT	A0A368PZV7	K3XWC3	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.465
A0A368PZV7	K3XXA8_SETIT	A0A368PZV7	K3XXA8	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.526
A0A368PZV7	K3Y5C8_SETIT	A0A368PZV7	K3Y5C8	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.461
A0A368PZV7	K3Y5N5_SETIT	A0A368PZV7	K3Y5N5	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.478
A0A368PZV7	K3Y5Q9_SETIT	A0A368PZV7	K3Y5Q9	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.456
A0A368PZV7	K3YPZ9_SETIT	A0A368PZV7	K3YPZ9	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.416
A0A368PZV7	K3YQJ8_SETIT	A0A368PZV7	K3YQJ8	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.449
A0A368PZV7	K3YSM8_SETIT	A0A368PZV7	K3YSM8	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.533
A0A368PZV7	K3YSV1_SETIT	A0A368PZV7	K3YSV1	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.516
A0A368PZV7	K3Z3Z1_SETIT	A0A368PZV7	K3Z3Z1	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.430
A0A368PZV7	K3ZCP1_SETIT	A0A368PZV7	K3ZCP1	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.486
A0A368PZV7	K4A692_SETIT	A0A368PZV7	K4A692	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.472

page 1 of 26

Server load: medium (48%) [HD]

Permalink

Network

Cooccurrence

Experiments

Neighborhood

Databases

Fusion

Textmining

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About