(47 nodes) Fatty acid beta-oxidation, and Synthesis and degradation of ketone bodies network (Setaria italica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A368PJU5	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (727 aa)
	A0A368Q140	Elf4 domain-containing protein. (201 aa)
	A0A368QU62	Uncharacterized protein. (588 aa)
	A0A368QUR1	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (687 aa)
	A0A368QWL5	Uncharacterized protein. (417 aa)
	A0A368R187	Pyruvate carboxyltransferase domain-containing protein. (448 aa)
	A0A368RAJ6	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (415 aa)
	A0A368RJ70	Uncharacterized protein. (577 aa)
	A0A368RKB5	Pyruvate carboxyltransferase domain-containing protein. (448 aa)
	A0A368RKW3	Pyruvate carboxyltransferase domain-containing protein. (448 aa)
	A0A368RR95	Gnk2-homologous domain-containing protein. (366 aa)
	A0A368S021	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (625 aa)
	A0A368S0A2	Uncharacterized protein. (525 aa)
	A0A368S1T8	Pyruvate carboxyltransferase domain-containing protein. (389 aa)
	A0A368S8T3	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (339 aa)
	K3XEZ8_SETIT	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (723 aa)
	K3XHY3_SETIT	Uncharacterized protein. (436 aa)
	K3XI66_SETIT	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (421 aa)
	K3XJR0_SETIT	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (337 aa)
	K3XKH5_SETIT	Uncharacterized protein. (299 aa)
	K3XKL1_SETIT	Uncharacterized protein. (292 aa)
	K3XV57_SETIT	Uncharacterized protein. (908 aa)
	K3XVP9_SETIT	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (669 aa)
	K3XVQ4_SETIT	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (667 aa)
	K3XZM1_SETIT	SCP2 domain-containing protein. (170 aa)
	K3Y7S6_SETIT	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (401 aa)
	K3Y7T1_SETIT	Uncharacterized protein. (399 aa)
	K3YAC9_SETIT	MaoC-like domain-containing protein. (173 aa)
	K3YMB0_SETIT	Uncharacterized protein. (430 aa)
	K3YQ05_SETIT	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (799 aa)
	K3YQ79_SETIT	Acetyl-coenzyme A synthetase. (753 aa)
	K3YSA3_SETIT	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (461 aa)
	K3YTU3_SETIT	Uncharacterized protein. (346 aa)
	K3YUG6_SETIT	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (302 aa)
	K3Z0E1_SETIT	SCP2 domain-containing protein. (68 aa)
	K3Z476_SETIT	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (719 aa)
	K3ZHJ1_SETIT	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (700 aa)
	K3ZIT1_SETIT	Pyruvate carboxyltransferase domain-containing protein. (388 aa)
	K3ZIX8_SETIT	PKS_ER domain-containing protein. (366 aa)
	K3ZQQ2_SETIT	Uncharacterized protein. (834 aa)
	K3ZRR8_SETIT	Uncharacterized protein. (594 aa)
	K3ZT06_SETIT	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. (470 aa)
	K4A1Z2_SETIT	Elf4 domain-containing protein. (113 aa)
	K4A818_SETIT	Uncharacterized protein. (548 aa)
	K4A9K9_SETIT	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. (464 aa)
	K4A9N1_SETIT	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (461 aa)
	K4ADS8_SETIT	Uncharacterized protein. (268 aa)

Your Current Organism:

Setaria italica

NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A368PJU5	A0A368Q140	A0A368PJU5	A0A368Q140	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Elf4 domain-containing protein.	0.544
A0A368PJU5	A0A368QUR1	A0A368PJU5	A0A368QUR1	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.876
A0A368PJU5	A0A368QWL5	A0A368PJU5	A0A368QWL5	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Uncharacterized protein.	0.637
A0A368PJU5	A0A368R187	A0A368PJU5	A0A368R187	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Pyruvate carboxyltransferase domain-containing protein.	0.467
A0A368PJU5	A0A368RAJ6	A0A368PJU5	A0A368RAJ6	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.979
A0A368PJU5	A0A368RJ70	A0A368PJU5	A0A368RJ70	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Uncharacterized protein.	0.465
A0A368PJU5	A0A368RKB5	A0A368PJU5	A0A368RKB5	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Pyruvate carboxyltransferase domain-containing protein.	0.467
A0A368PJU5	A0A368RKW3	A0A368PJU5	A0A368RKW3	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Pyruvate carboxyltransferase domain-containing protein.	0.467
A0A368PJU5	A0A368RR95	A0A368PJU5	A0A368RR95	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Gnk2-homologous domain-containing protein.	0.552
A0A368PJU5	A0A368S0A2	A0A368PJU5	A0A368S0A2	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Uncharacterized protein.	0.867
A0A368PJU5	A0A368S1T8	A0A368PJU5	A0A368S1T8	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Pyruvate carboxyltransferase domain-containing protein.	0.467
A0A368PJU5	K3XEZ8_SETIT	A0A368PJU5	K3XEZ8	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	0.672
A0A368PJU5	K3XHY3_SETIT	A0A368PJU5	K3XHY3	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Uncharacterized protein.	0.867
A0A368PJU5	K3XI66_SETIT	A0A368PJU5	K3XI66	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.979
A0A368PJU5	K3XJR0_SETIT	A0A368PJU5	K3XJR0	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	0.778
A0A368PJU5	K3XKH5_SETIT	A0A368PJU5	K3XKH5	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Uncharacterized protein.	0.575
A0A368PJU5	K3XKL1_SETIT	A0A368PJU5	K3XKL1	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Uncharacterized protein.	0.607
A0A368PJU5	K3XV57_SETIT	A0A368PJU5	K3XV57	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Uncharacterized protein.	0.662
A0A368PJU5	K3XVP9_SETIT	A0A368PJU5	K3XVP9	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.919
A0A368PJU5	K3XVQ4_SETIT	A0A368PJU5	K3XVQ4	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.919

page 1 of 82

Server load: low (14%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About