(41 nodes) Carotenoid biosynthesis, and Xanthophyll metabolic process network (Setaria italica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0Q3VVM9	Uncharacterized protein. (231 aa)
	A0A368PH34	Uncharacterized protein. (495 aa)
	A0A368PT22	Uncharacterized protein; Belongs to the cytochrome P450 family. (126 aa)
	A0A368PT59	Uncharacterized protein; Belongs to the cytochrome P450 family. (645 aa)
	A0A368PWA5	Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'. (659 aa)
	A0A368Q0B7	Uncharacterized protein. (610 aa)
	A0A368QKI4	NnrU domain-containing protein. (119 aa)
	A0A368QNN2	Uncharacterized protein. (406 aa)
	A0A368RB14	Uncharacterized protein. (553 aa)
	A0A368RUS1	FHA domain-containing protein. (751 aa)
	A0A368S6C3	Uncharacterized protein. (602 aa)
	A0A368S8M0	DUF4033 domain-containing protein. (289 aa)
	A0A368SC76	Uncharacterized protein. (322 aa)
	A0A368SNG1	Uncharacterized protein; Belongs to the cytochrome P450 family. (550 aa)
	A0A368SR01	Uncharacterized protein. (116 aa)
	A0A368SWL6	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family. (309 aa)
	K3XG48_SETIT	Uncharacterized protein. (560 aa)
	K3XGC4_SETIT	Uncharacterized protein. (540 aa)
	K3XRU8_SETIT	Uncharacterized protein. (577 aa)
	K3XSH0_SETIT	Uncharacterized protein. (587 aa)
	K3XVJ8_SETIT	Uncharacterized protein. (706 aa)
	K3XX81_SETIT	Uncharacterized protein. (415 aa)
	K3Y5S5_SETIT	Zeaxanthin epoxidase, chloroplastic; Converts zeaxanthin into antheraxanthin and subsequently violaxanthin. (661 aa)
	K3Y5W6_SETIT	Uncharacterized protein. (631 aa)
	K3Y790_SETIT	VDE domain-containing protein. (450 aa)
	K3Y8V7_SETIT	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family. (311 aa)
	K3YBU1_SETIT	FHA domain-containing protein. (635 aa)
	K3YQU1_SETIT	Uncharacterized protein; Belongs to the cytochrome P450 family. (631 aa)
	K3Z5S0_SETIT	Uncharacterized protein. (487 aa)
	K3Z640_SETIT	NnrU domain-containing protein. (455 aa)
	K3ZHU6_SETIT	Amino_oxidase domain-containing protein. (592 aa)
	K3ZI44_SETIT	Uncharacterized protein. (508 aa)
	K3ZNB2_SETIT	DUF4033 domain-containing protein. (291 aa)
	K3ZRN0_SETIT	Uncharacterized protein. (606 aa)
	K3ZRV6_SETIT	Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'. (575 aa)
	K3ZTC9_SETIT	Uncharacterized protein. (440 aa)
	K4A7P8_SETIT	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family. (572 aa)
	K4A7Q8_SETIT	Amino_oxidase domain-containing protein. (571 aa)
	K4ACY9_SETIT	AB hydrolase-1 domain-containing protein. (308 aa)
	K4ADI9_SETIT	Uncharacterized protein. (281 aa)
	K4AEU4_SETIT	Uncharacterized protein. (224 aa)

Your Current Organism:

Setaria italica

NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0Q3VVM9	A0A368PH34	A0A0Q3VVM9	A0A368PH34	Uncharacterized protein.	Uncharacterized protein.	0.522
A0A0Q3VVM9	A0A368PWA5	A0A0Q3VVM9	A0A368PWA5	Uncharacterized protein.	Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.	0.429
A0A0Q3VVM9	A0A368QKI4	A0A0Q3VVM9	A0A368QKI4	Uncharacterized protein.	NnrU domain-containing protein.	0.400
A0A0Q3VVM9	K3XGC4_SETIT	A0A0Q3VVM9	K3XGC4	Uncharacterized protein.	Uncharacterized protein.	0.480
A0A0Q3VVM9	K3Y790_SETIT	A0A0Q3VVM9	K3Y790	Uncharacterized protein.	VDE domain-containing protein.	0.456
A0A0Q3VVM9	K3Z640_SETIT	A0A0Q3VVM9	K3Z640	Uncharacterized protein.	NnrU domain-containing protein.	0.400
A0A0Q3VVM9	K3ZHU6_SETIT	A0A0Q3VVM9	K3ZHU6	Uncharacterized protein.	Amino_oxidase domain-containing protein.	0.518
A0A0Q3VVM9	K3ZRV6_SETIT	A0A0Q3VVM9	K3ZRV6	Uncharacterized protein.	Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.	0.429
A0A0Q3VVM9	K4A7Q8_SETIT	A0A0Q3VVM9	K4A7Q8	Uncharacterized protein.	Amino_oxidase domain-containing protein.	0.437
A0A368PH34	A0A0Q3VVM9	A0A368PH34	A0A0Q3VVM9	Uncharacterized protein.	Uncharacterized protein.	0.522
A0A368PH34	A0A368PT22	A0A368PH34	A0A368PT22	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.489
A0A368PH34	A0A368PT59	A0A368PH34	A0A368PT59	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.946
A0A368PH34	A0A368PWA5	A0A368PH34	A0A368PWA5	Uncharacterized protein.	Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.	0.954
A0A368PH34	A0A368Q0B7	A0A368PH34	A0A368Q0B7	Uncharacterized protein.	Uncharacterized protein.	0.448
A0A368PH34	A0A368QKI4	A0A368PH34	A0A368QKI4	Uncharacterized protein.	NnrU domain-containing protein.	0.564
A0A368PH34	A0A368QNN2	A0A368PH34	A0A368QNN2	Uncharacterized protein.	Uncharacterized protein.	0.465
A0A368PH34	A0A368RUS1	A0A368PH34	A0A368RUS1	Uncharacterized protein.	FHA domain-containing protein.	0.504
A0A368PH34	A0A368S8M0	A0A368PH34	A0A368S8M0	Uncharacterized protein.	DUF4033 domain-containing protein.	0.937
A0A368PH34	A0A368SC76	A0A368PH34	A0A368SC76	Uncharacterized protein.	Uncharacterized protein.	0.429
A0A368PH34	A0A368SNG1	A0A368PH34	A0A368SNG1	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.957

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