(128 nodes) SNARE complex, and Retrograde transport at the Trans-Golgi-Network network (Setaria italica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0Q3SVX1	Uncharacterized protein. (633 aa)
	A0A368PGM4	t-SNARE coiled-coil homology domain-containing protein. (307 aa)
	A0A368PP02	Remorin_C domain-containing protein. (141 aa)
	A0A368PPC7	Uncharacterized protein. (249 aa)
	A0A368PPQ7	Uncharacterized protein. (214 aa)
	A0A368PTS2	Remorin_C domain-containing protein. (158 aa)
	A0A368PUA3	Uncharacterized protein. (253 aa)
	A0A368PZP3	Uncharacterized protein. (402 aa)
	A0A368Q050	Uncharacterized protein. (215 aa)
	A0A368Q0Z0	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. (218 aa)
	A0A368Q811	Uncharacterized protein. (420 aa)
	A0A368Q9C8	Uncharacterized protein. (820 aa)
	A0A368QAV5	Uncharacterized protein. (341 aa)
	A0A368QD31	Sec39 domain-containing protein. (2457 aa)
	A0A368QDH0	t-SNARE coiled-coil homology domain-containing protein. (79 aa)
	A0A368QFQ8	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (270 aa)
	A0A368QJ15	Uncharacterized protein. (636 aa)
	A0A368QM30	Uncharacterized protein. (924 aa)
	A0A368QRZ2	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (611 aa)
	A0A368QSI9	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (338 aa)
	A0A368QWD7	J domain-containing protein. (269 aa)
	A0A368RAU9	Uncharacterized protein. (724 aa)
	A0A368RDF5	MFS domain-containing protein. (520 aa)
	A0A368RF08	Vps53_N domain-containing protein. (838 aa)
	A0A368RHY0	t-SNARE coiled-coil homology domain-containing protein. (232 aa)
	A0A368RQ31	WD_REPEATS_REGION domain-containing protein. (350 aa)
	A0A368RT87	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (739 aa)
	A0A368RT95	Uncharacterized protein. (237 aa)
	A0A368RZ47	Uncharacterized protein. (296 aa)
	A0A368S174	Uncharacterized protein. (115 aa)
	A0A368S468	t-SNARE coiled-coil homology domain-containing protein. (235 aa)
	A0A368SDQ1	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (309 aa)
	A0A368SIH1	Uncharacterized protein. (161 aa)
	A0A368SIY2	Uncharacterized protein. (689 aa)
	A0A368SKI2	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (645 aa)
	K3XDW2_SETIT	Uncharacterized protein. (1226 aa)
	K3XE20_SETIT	Uncharacterized protein. (1073 aa)
	K3XEN6_SETIT	Vps53_N domain-containing protein. (798 aa)
	K3XEU3_SETIT	Uncharacterized protein. (760 aa)
	K3XJG5_SETIT	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (350 aa)
	K3XKR2_SETIT	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (283 aa)
	K3XLR3_SETIT	V-SNARE domain-containing protein. (221 aa)
	K3XLR5_SETIT	t-SNARE coiled-coil homology domain-containing protein. (221 aa)
	K3XLT5_SETIT	Uncharacterized protein; Belongs to the synaptobrevin family. (218 aa)
	K3XLU0_SETIT	Uncharacterized protein; Belongs to the synaptobrevin family. (218 aa)
	K3XMG7_SETIT	t-SNARE coiled-coil homology domain-containing protein. (177 aa)
	K3XSA9_SETIT	Uncharacterized protein; Belongs to the synaptobrevin family. (360 aa)
	K3XVA9_SETIT	Uncharacterized protein. (820 aa)
	K3XVR6_SETIT	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (655 aa)
	K3XY82_SETIT	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (325 aa)
	K3XYX1_SETIT	t-SNARE coiled-coil homology domain-containing protein. (256 aa)
	K3Y1P7_SETIT	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (283 aa)
	K3Y2K5_SETIT	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (309 aa)
	K3Y4X2_SETIT	Vps54 domain-containing protein. (991 aa)
	K3Y7A1_SETIT	Uncharacterized protein. (448 aa)
	K3Y7V7_SETIT	YqaJ domain-containing protein. (391 aa)
	K3Y8T7_SETIT	Syntaxin-18_N domain-containing protein. (317 aa)
	K3Y8Z5_SETIT	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (304 aa)
	K3Y989_SETIT	Uncharacterized protein. (283 aa)
	K3Y9T4_SETIT	t-SNARE coiled-coil homology domain-containing protein. (231 aa)
	K3YA07_SETIT	Uncharacterized protein. (212 aa)
	K3YA66_SETIT	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (196 aa)
	K3YAL3_SETIT	Uncharacterized protein. (146 aa)
	K3YBP4_SETIT	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (43 aa)
	K3YD62_SETIT	Uncharacterized protein. (231 aa)
	K3YE87_SETIT	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (314 aa)
	K3YFL4_SETIT	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (282 aa)
	K3YGC0_SETIT	Uncharacterized protein. (780 aa)
	K3YHN8_SETIT	WD_REPEATS_REGION domain-containing protein. (440 aa)
	K3YIX0_SETIT	Uncharacterized protein. (289 aa)
	K3YJ71_SETIT	Uncharacterized protein; Belongs to the synaptobrevin family. (262 aa)
	K3YJF1_SETIT	Uncharacterized protein; Belongs to the synaptobrevin family. (239 aa)
	K3YJF8_SETIT	Uncharacterized protein. (237 aa)
	K3YK96_SETIT	t-SNARE coiled-coil homology domain-containing protein. (122 aa)
	K3YPF9_SETIT	RIC1 domain-containing protein. (1124 aa)
	K3YQ16_SETIT	Uncharacterized protein. (787 aa)
	K3YQ57_SETIT	Cog4 domain-containing protein. (763 aa)
	K3YQP2_SETIT	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (660 aa)
	K3YRD8_SETIT	MFS domain-containing protein. (547 aa)
	K3YRY9_SETIT	Uncharacterized protein. (489 aa)
	K3YUN3_SETIT	t-SNARE coiled-coil homology domain-containing protein. (290 aa)
	K3YUZ2_SETIT	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (269 aa)
	K3YV18_SETIT	Uncharacterized protein. (263 aa)
	K3YV27_SETIT	t-SNARE coiled-coil homology domain-containing protein. (261 aa)
	K3YVB9_SETIT	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. (242 aa)
	K3YVJ1_SETIT	Remorin_C domain-containing protein. (223 aa)
	K3YY73_SETIT	Uncharacterized protein. (222 aa)
	K3YYV6_SETIT	Remorin_C domain-containing protein. (117 aa)
	K3YZ06_SETIT	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (304 aa)
	K3YZC3_SETIT	Uncharacterized protein. (151 aa)
	K3Z1G7_SETIT	t-SNARE coiled-coil homology domain-containing protein. (121 aa)
	K3Z324_SETIT	Sec39 domain-containing protein. (2413 aa)
	K3Z3E6_SETIT	TMF_TATA_bd domain-containing protein. (1037 aa)
	K3Z3N4_SETIT	Uncharacterized protein. (904 aa)
	K3Z448_SETIT	Uncharacterized protein. (743 aa)
	K3Z4P7_SETIT	Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family. (608 aa)
	K3Z886_SETIT	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (307 aa)
	K3ZHC1_SETIT	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (858 aa)
	K3ZHG7_SETIT	Uncharacterized protein. (746 aa)
	K3ZJA9_SETIT	t-SNARE coiled-coil homology domain-containing protein. (315 aa)
	K3ZQU9_SETIT	GRIP domain-containing protein. (789 aa)
	K3ZUC4_SETIT	Uncharacterized protein. (374 aa)
	K3ZVL2_SETIT	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (303 aa)
	K3ZVL3_SETIT	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (303 aa)
	K3ZW35_SETIT	t-SNARE coiled-coil homology domain-containing protein. (266 aa)
	K3ZWC9_SETIT	Uncharacterized protein; Belongs to the synaptobrevin family. (250 aa)
	K3ZWK9_SETIT	Uncharacterized protein. (234 aa)
	K3ZX03_SETIT	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (203 aa)
	K4A560_SETIT	Uncharacterized protein. (1083 aa)
	K4A634_SETIT	Uncharacterized protein. (771 aa)
	K4A685_SETIT	Uncharacterized protein. (751 aa)
	K4A6H7_SETIT	Uncharacterized protein. (700 aa)
	K4A6L4_SETIT	Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. (686 aa)
	K4A745_SETIT	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (623 aa)
	K4A7R9_SETIT	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (567 aa)
	K4A824_SETIT	Uncharacterized protein. (547 aa)
	K4AD96_SETIT	t-SNARE coiled-coil homology domain-containing protein. (294 aa)
	K4ADD2_SETIT	Uncharacterized protein. (289 aa)
	K4AE75_SETIT	t-SNARE coiled-coil homology domain-containing protein. (248 aa)
	K4AED1_SETIT	Membrin; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network. (241 aa)
	K4AFB0_SETIT	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (203 aa)
	K4AFK4_SETIT	Uncharacterized protein. (187 aa)
	K4AIH0_SETIT	Remorin_C domain-containing protein. (118 aa)
	K4AIJ1_SETIT	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (666 aa)
	K4AJZ1_SETIT	Uncharacterized protein. (645 aa)
	K4AKS1_SETIT	Uncharacterized protein. (305 aa)
	K4AL45_SETIT	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (314 aa)
	K4AML7_SETIT	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (252 aa)

Your Current Organism:

Setaria italica

NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0Q3SVX1	A0A368Q0Z0	A0A0Q3SVX1	A0A368Q0Z0	Uncharacterized protein.	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	0.774
A0A0Q3SVX1	A0A368QDH0	A0A0Q3SVX1	A0A368QDH0	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.837
A0A0Q3SVX1	A0A368RF08	A0A0Q3SVX1	A0A368RF08	Uncharacterized protein.	Vps53_N domain-containing protein.	0.804
A0A0Q3SVX1	A0A368RHY0	A0A0Q3SVX1	A0A368RHY0	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.559
A0A0Q3SVX1	A0A368S174	A0A0Q3SVX1	A0A368S174	Uncharacterized protein.	Uncharacterized protein.	0.950
A0A0Q3SVX1	A0A368S468	A0A0Q3SVX1	A0A368S468	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.559
A0A0Q3SVX1	A0A368SIY2	A0A0Q3SVX1	A0A368SIY2	Uncharacterized protein.	Uncharacterized protein.	0.730
A0A0Q3SVX1	K3XE20_SETIT	A0A0Q3SVX1	K3XE20	Uncharacterized protein.	Uncharacterized protein.	0.993
A0A0Q3SVX1	K3XEN6_SETIT	A0A0Q3SVX1	K3XEN6	Uncharacterized protein.	Vps53_N domain-containing protein.	0.804
A0A0Q3SVX1	K3XJG5_SETIT	A0A0Q3SVX1	K3XJG5	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.837
A0A0Q3SVX1	K3XLR3_SETIT	A0A0Q3SVX1	K3XLR3	Uncharacterized protein.	V-SNARE domain-containing protein.	0.799
A0A0Q3SVX1	K3XLR5_SETIT	A0A0Q3SVX1	K3XLR5	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.799
A0A0Q3SVX1	K3XMG7_SETIT	A0A0Q3SVX1	K3XMG7	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.559
A0A0Q3SVX1	K3XSA9_SETIT	A0A0Q3SVX1	K3XSA9	Uncharacterized protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.758
A0A0Q3SVX1	K3XVA9_SETIT	A0A0Q3SVX1	K3XVA9	Uncharacterized protein.	Uncharacterized protein.	0.993
A0A0Q3SVX1	K3XY82_SETIT	A0A0Q3SVX1	K3XY82	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.862
A0A0Q3SVX1	K3Y4X2_SETIT	A0A0Q3SVX1	K3Y4X2	Uncharacterized protein.	Vps54 domain-containing protein.	0.858
A0A0Q3SVX1	K3Y9T4_SETIT	A0A0Q3SVX1	K3Y9T4	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.559
A0A0Q3SVX1	K3YAL3_SETIT	A0A0Q3SVX1	K3YAL3	Uncharacterized protein.	Uncharacterized protein.	0.950
A0A0Q3SVX1	K3YGC0_SETIT	A0A0Q3SVX1	K3YGC0	Uncharacterized protein.	Uncharacterized protein.	0.993

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