(17 nodes) Mixed, incl. Dsl1/NZR complex, and Membrane fusion protein Use1 network (Setaria italica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A368PTS2	Remorin_C domain-containing protein. (158 aa)
	A0A368PZP3	Uncharacterized protein. (402 aa)
	A0A368Q9C8	Uncharacterized protein. (820 aa)
	A0A368QD31	Sec39 domain-containing protein. (2457 aa)
	A0A368RT95	Uncharacterized protein. (237 aa)
	K3XDW2_SETIT	Uncharacterized protein. (1226 aa)
	K3XLT5_SETIT	Uncharacterized protein; Belongs to the synaptobrevin family. (218 aa)
	K3XLU0_SETIT	Uncharacterized protein; Belongs to the synaptobrevin family. (218 aa)
	K3Y8T7_SETIT	Syntaxin-18_N domain-containing protein. (317 aa)
	K3Y989_SETIT	Uncharacterized protein. (283 aa)
	K3YD62_SETIT	Uncharacterized protein. (231 aa)
	K3YJF8_SETIT	Uncharacterized protein. (237 aa)
	K3YQ16_SETIT	Uncharacterized protein. (787 aa)
	K3Z324_SETIT	Sec39 domain-containing protein. (2413 aa)
	K3ZHC1_SETIT	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (858 aa)
	K3ZHG7_SETIT	Uncharacterized protein. (746 aa)
	K3ZWK9_SETIT	Uncharacterized protein. (234 aa)

Your Current Organism:

Setaria italica

NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A368PTS2	A0A368PZP3	A0A368PTS2	A0A368PZP3	Remorin_C domain-containing protein.	Uncharacterized protein.	0.775
A0A368PTS2	A0A368Q9C8	A0A368PTS2	A0A368Q9C8	Remorin_C domain-containing protein.	Uncharacterized protein.	0.844
A0A368PTS2	A0A368QD31	A0A368PTS2	A0A368QD31	Remorin_C domain-containing protein.	Sec39 domain-containing protein.	0.680
A0A368PTS2	A0A368RT95	A0A368PTS2	A0A368RT95	Remorin_C domain-containing protein.	Uncharacterized protein.	0.741
A0A368PTS2	K3XDW2_SETIT	A0A368PTS2	K3XDW2	Remorin_C domain-containing protein.	Uncharacterized protein.	0.865
A0A368PTS2	K3Y8T7_SETIT	A0A368PTS2	K3Y8T7	Remorin_C domain-containing protein.	Syntaxin-18_N domain-containing protein.	0.865
A0A368PTS2	K3Y989_SETIT	A0A368PTS2	K3Y989	Remorin_C domain-containing protein.	Uncharacterized protein.	0.741
A0A368PTS2	K3YD62_SETIT	A0A368PTS2	K3YD62	Remorin_C domain-containing protein.	Uncharacterized protein.	0.741
A0A368PTS2	K3YJF8_SETIT	A0A368PTS2	K3YJF8	Remorin_C domain-containing protein.	Uncharacterized protein.	0.775
A0A368PTS2	K3YQ16_SETIT	A0A368PTS2	K3YQ16	Remorin_C domain-containing protein.	Uncharacterized protein.	0.844
A0A368PTS2	K3Z324_SETIT	A0A368PTS2	K3Z324	Remorin_C domain-containing protein.	Sec39 domain-containing protein.	0.680
A0A368PTS2	K3ZHG7_SETIT	A0A368PTS2	K3ZHG7	Remorin_C domain-containing protein.	Uncharacterized protein.	0.876
A0A368PTS2	K3ZWK9_SETIT	A0A368PTS2	K3ZWK9	Remorin_C domain-containing protein.	Uncharacterized protein.	0.775
A0A368PZP3	A0A368PTS2	A0A368PZP3	A0A368PTS2	Uncharacterized protein.	Remorin_C domain-containing protein.	0.775
A0A368PZP3	A0A368Q9C8	A0A368PZP3	A0A368Q9C8	Uncharacterized protein.	Uncharacterized protein.	0.949
A0A368PZP3	A0A368QD31	A0A368PZP3	A0A368QD31	Uncharacterized protein.	Sec39 domain-containing protein.	0.945
A0A368PZP3	A0A368RT95	A0A368PZP3	A0A368RT95	Uncharacterized protein.	Uncharacterized protein.	0.960
A0A368PZP3	K3XDW2_SETIT	A0A368PZP3	K3XDW2	Uncharacterized protein.	Uncharacterized protein.	0.958
A0A368PZP3	K3XLT5_SETIT	A0A368PZP3	K3XLT5	Uncharacterized protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.892
A0A368PZP3	K3XLU0_SETIT	A0A368PZP3	K3XLU0	Uncharacterized protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.892

page 1 of 13

Server load: low (22%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About