(21 nodes) ANK repeat network (Setaria italica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0Q3V1T6	ANK_REP_REGION domain-containing protein. (312 aa)
	A0A368QHZ9	ANK_REP_REGION domain-containing protein. (625 aa)
	A0A368QT25	ANK_REP_REGION domain-containing protein. (338 aa)
	A0A368RVP6	ANK_REP_REGION domain-containing protein. (314 aa)
	A0A368S0M7	ANK_REP_REGION domain-containing protein. (603 aa)
	A0A368S8R8	ANK_REP_REGION domain-containing protein. (555 aa)
	A0A368SP50	Uncharacterized protein. (519 aa)
	K3XX75_SETIT	Uncharacterized protein. (417 aa)
	K3YHD7_SETIT	Uncharacterized protein. (483 aa)
	K3YQW3_SETIT	ANK_REP_REGION domain-containing protein. (622 aa)
	K3YRW7_SETIT	Uncharacterized protein. (496 aa)
	K3Z502_SETIT	ANK_REP_REGION domain-containing protein. (566 aa)
	K3Z7W0_SETIT	Uncharacterized protein. (330 aa)
	K3ZHN7_SETIT	ANK_REP_REGION domain-containing protein. (660 aa)
	K3ZS02_SETIT	ANK_REP_REGION domain-containing protein. (562 aa)
	K3ZSE9_SETIT	Uncharacterized protein. (513 aa)
	K3ZXQ1_SETIT	ANK_REP_REGION domain-containing protein. (153 aa)
	K4A3D9_SETIT	Uncharacterized protein. (892 aa)
	K4A6X5_SETIT	Uncharacterized protein. (643 aa)
	K4AA39_SETIT	ANK_REP_REGION domain-containing protein. (440 aa)
	K4AF60_SETIT	ANK_REP_REGION domain-containing protein. (208 aa)

Your Current Organism:

Setaria italica

NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0Q3V1T6	A0A368QHZ9	A0A0Q3V1T6	A0A368QHZ9	ANK_REP_REGION domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.478
A0A0Q3V1T6	A0A368QT25	A0A0Q3V1T6	A0A368QT25	ANK_REP_REGION domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.525
A0A0Q3V1T6	A0A368S0M7	A0A0Q3V1T6	A0A368S0M7	ANK_REP_REGION domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.478
A0A0Q3V1T6	A0A368S8R8	A0A0Q3V1T6	A0A368S8R8	ANK_REP_REGION domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.480
A0A0Q3V1T6	A0A368SP50	A0A0Q3V1T6	A0A368SP50	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.524
A0A0Q3V1T6	K3XX75_SETIT	A0A0Q3V1T6	K3XX75	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.518
A0A0Q3V1T6	K3YQW3_SETIT	A0A0Q3V1T6	K3YQW3	ANK_REP_REGION domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.501
A0A0Q3V1T6	K3YRW7_SETIT	A0A0Q3V1T6	K3YRW7	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.513
A0A0Q3V1T6	K3Z502_SETIT	A0A0Q3V1T6	K3Z502	ANK_REP_REGION domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.458
A0A0Q3V1T6	K3Z7W0_SETIT	A0A0Q3V1T6	K3Z7W0	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.472
A0A0Q3V1T6	K3ZHN7_SETIT	A0A0Q3V1T6	K3ZHN7	ANK_REP_REGION domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.499
A0A0Q3V1T6	K3ZS02_SETIT	A0A0Q3V1T6	K3ZS02	ANK_REP_REGION domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.513
A0A0Q3V1T6	K3ZXQ1_SETIT	A0A0Q3V1T6	K3ZXQ1	ANK_REP_REGION domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.520
A0A0Q3V1T6	K4A3D9_SETIT	A0A0Q3V1T6	K4A3D9	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.489
A0A0Q3V1T6	K4A6X5_SETIT	A0A0Q3V1T6	K4A6X5	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.524
A0A0Q3V1T6	K4AA39_SETIT	A0A0Q3V1T6	K4AA39	ANK_REP_REGION domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.543
A0A0Q3V1T6	K4AF60_SETIT	A0A0Q3V1T6	K4AF60	ANK_REP_REGION domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.515
A0A368QHZ9	A0A0Q3V1T6	A0A368QHZ9	A0A0Q3V1T6	ANK_REP_REGION domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.478
A0A368QHZ9	A0A368QT25	A0A368QHZ9	A0A368QT25	ANK_REP_REGION domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.454
A0A368QHZ9	A0A368RVP6	A0A368QHZ9	A0A368RVP6	ANK_REP_REGION domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.476

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