(11 nodes) Mixed, incl. Protein OCTOPUS-like, and VQ motif-containing protein 8/17/18/20/21/25 network (Setaria italica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A368QY80	F-box domain-containing protein. (338 aa)
	A0A368R4R4	Uncharacterized protein. (251 aa)
	A0A368R4S4	GUB_WAK_bind domain-containing protein. (199 aa)
	A0A368S890	GTD-binding domain-containing protein. (375 aa)
	A0A368SBS0	Uncharacterized protein. (466 aa)
	A0A368SHS9	Uncharacterized protein. (247 aa)
	K3XEC9_SETIT	PWWP domain-containing protein. (897 aa)
	K3Y5B5_SETIT	Uncharacterized protein. (785 aa)
	K3ZJZ3_SETIT	Uncharacterized protein. (188 aa)
	K3ZP28_SETIT	Uncharacterized protein. (425 aa)
	K4AG38_SETIT	VQ domain-containing protein. (160 aa)

Your Current Organism:

Setaria italica

NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A368QY80	A0A368R4R4	A0A368QY80	A0A368R4R4	F-box domain-containing protein.	Uncharacterized protein.	0.528
A0A368QY80	A0A368R4S4	A0A368QY80	A0A368R4S4	F-box domain-containing protein.	GUB_WAK_bind domain-containing protein.	0.408
A0A368QY80	A0A368S890	A0A368QY80	A0A368S890	F-box domain-containing protein.	GTD-binding domain-containing protein.	0.479
A0A368QY80	A0A368SBS0	A0A368QY80	A0A368SBS0	F-box domain-containing protein.	Uncharacterized protein.	0.473
A0A368QY80	A0A368SHS9	A0A368QY80	A0A368SHS9	F-box domain-containing protein.	Uncharacterized protein.	0.452
A0A368QY80	K3XEC9_SETIT	A0A368QY80	K3XEC9	F-box domain-containing protein.	PWWP domain-containing protein.	0.414
A0A368QY80	K3Y5B5_SETIT	A0A368QY80	K3Y5B5	F-box domain-containing protein.	Uncharacterized protein.	0.470
A0A368QY80	K3ZJZ3_SETIT	A0A368QY80	K3ZJZ3	F-box domain-containing protein.	Uncharacterized protein.	0.519
A0A368QY80	K3ZP28_SETIT	A0A368QY80	K3ZP28	F-box domain-containing protein.	Uncharacterized protein.	0.466
A0A368QY80	K4AG38_SETIT	A0A368QY80	K4AG38	F-box domain-containing protein.	VQ domain-containing protein.	0.448
A0A368R4R4	A0A368QY80	A0A368R4R4	A0A368QY80	Uncharacterized protein.	F-box domain-containing protein.	0.528
A0A368R4R4	A0A368S890	A0A368R4R4	A0A368S890	Uncharacterized protein.	GTD-binding domain-containing protein.	0.511
A0A368R4R4	A0A368SBS0	A0A368R4R4	A0A368SBS0	Uncharacterized protein.	Uncharacterized protein.	0.548
A0A368R4R4	A0A368SHS9	A0A368R4R4	A0A368SHS9	Uncharacterized protein.	Uncharacterized protein.	0.521
A0A368R4R4	K3XEC9_SETIT	A0A368R4R4	K3XEC9	Uncharacterized protein.	PWWP domain-containing protein.	0.502
A0A368R4R4	K3Y5B5_SETIT	A0A368R4R4	K3Y5B5	Uncharacterized protein.	Uncharacterized protein.	0.521
A0A368R4R4	K3ZJZ3_SETIT	A0A368R4R4	K3ZJZ3	Uncharacterized protein.	Uncharacterized protein.	0.519
A0A368R4R4	K3ZP28_SETIT	A0A368R4R4	K3ZP28	Uncharacterized protein.	Uncharacterized protein.	0.547
A0A368R4R4	K4AG38_SETIT	A0A368R4R4	K4AG38	Uncharacterized protein.	VQ domain-containing protein.	0.559
A0A368R4S4	A0A368QY80	A0A368R4S4	A0A368QY80	GUB_WAK_bind domain-containing protein.	F-box domain-containing protein.	0.408

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