(49 nodes) Mostly uncharacterized, incl. Zein-binding, and E3 ligase, CCCH-type zinc finger network (Setaria italica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0Q3QSS3	Uncharacterized protein. (305 aa)
	A0A368PX93	LEA_2 domain-containing protein. (226 aa)
	A0A368Q185	Uncharacterized protein. (521 aa)
	A0A368Q713	Uncharacterized protein. (634 aa)
	A0A368QBW5	Uncharacterized protein. (507 aa)
	A0A368QGT4	C3H1-type domain-containing protein. (581 aa)
	A0A368QKE7	Uncharacterized protein. (490 aa)
	A0A368QZ00	Uncharacterized protein. (420 aa)
	A0A368R882	J domain-containing protein. (1655 aa)
	A0A368R936	Uncharacterized protein. (697 aa)
	A0A368R945	Uncharacterized protein. (601 aa)
	A0A368RB51	Uncharacterized protein. (731 aa)
	A0A368RDB2	ELM2 domain-containing protein. (451 aa)
	A0A368RRP2	Uncharacterized protein. (257 aa)
	A0A368RU21	Uncharacterized protein. (1418 aa)
	A0A368RXX1	OVATE domain-containing protein. (414 aa)
	A0A368SNC4	Uncharacterized protein. (898 aa)
	K3XEP6_SETIT	Zinc_ribbon_12 domain-containing protein. (792 aa)
	K3XER9_SETIT	Uncharacterized protein. (778 aa)
	K3XFU6_SETIT	FRIGIDA-like protein; Belongs to the Frigida family. (596 aa)
	K3XJX8_SETIT	Uncharacterized protein. (328 aa)
	K3XPC9_SETIT	BHLH domain-containing protein. (419 aa)
	K3Y4Q2_SETIT	Uncharacterized protein. (1330 aa)
	K3Y690_SETIT	Uncharacterized protein. (560 aa)
	K3Y7H0_SETIT	Uncharacterized protein. (430 aa)
	K3Y936_SETIT	GTD-binding domain-containing protein. (295 aa)
	K3YGJ3_SETIT	NAC domain-containing protein. (675 aa)
	K3YKU8_SETIT	Uncharacterized protein. (508 aa)
	K3YLR1_SETIT	GTD-binding domain-containing protein. (403 aa)
	K3YPT4_SETIT	Uncharacterized protein. (888 aa)
	K3YRA2_SETIT	Uncharacterized protein. (561 aa)
	K3YSL2_SETIT	Uncharacterized protein. (431 aa)
	K3Z411_SETIT	Zinc_ribbon_12 domain-containing protein. (767 aa)
	K3Z4T3_SETIT	C3H1-type domain-containing protein. (594 aa)
	K3ZFA0_SETIT	Uncharacterized protein. (590 aa)
	K3ZH23_SETIT	Uncharacterized protein; Belongs to the disease resistance NB-LRR family. (1025 aa)
	K3ZQI6_SETIT	DUF4378 domain-containing protein. (905 aa)
	K3ZRZ7_SETIT	PWWP domain-containing protein. (563 aa)
	K3ZUE7_SETIT	F-box domain-containing protein. (370 aa)
	K4A248_SETIT	Uncharacterized protein. (628 aa)
	K4A2N1_SETIT	Uncharacterized protein. (538 aa)
	K4A4X8_SETIT	Uncharacterized protein. (1297 aa)
	K4A7Q7_SETIT	Uncharacterized protein. (571 aa)
	K4AA87_SETIT	Uncharacterized protein. (432 aa)
	K4AAI7_SETIT	Uncharacterized protein. (414 aa)
	K4ABT9_SETIT	GTD-binding domain-containing protein. (358 aa)
	K4ACS5_SETIT	Myb-like domain-containing protein. (317 aa)
	K4AIR6_SETIT	GTD-binding domain-containing protein. (588 aa)
	K4AJS3_SETIT	FRIGIDA-like protein; Belongs to the Frigida family. (514 aa)

Your Current Organism:

Setaria italica

NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0Q3QSS3	A0A368PX93	A0A0Q3QSS3	A0A368PX93	Uncharacterized protein.	LEA_2 domain-containing protein.	0.463
A0A0Q3QSS3	A0A368Q185	A0A0Q3QSS3	A0A368Q185	Uncharacterized protein.	Uncharacterized protein.	0.482
A0A0Q3QSS3	A0A368Q713	A0A0Q3QSS3	A0A368Q713	Uncharacterized protein.	Uncharacterized protein.	0.473
A0A0Q3QSS3	A0A368QBW5	A0A0Q3QSS3	A0A368QBW5	Uncharacterized protein.	Uncharacterized protein.	0.434
A0A0Q3QSS3	A0A368QGT4	A0A0Q3QSS3	A0A368QGT4	Uncharacterized protein.	C3H1-type domain-containing protein.	0.453
A0A0Q3QSS3	A0A368R882	A0A0Q3QSS3	A0A368R882	Uncharacterized protein.	J domain-containing protein.	0.412
A0A0Q3QSS3	A0A368R936	A0A0Q3QSS3	A0A368R936	Uncharacterized protein.	Uncharacterized protein.	0.528
A0A0Q3QSS3	A0A368R945	A0A0Q3QSS3	A0A368R945	Uncharacterized protein.	Uncharacterized protein.	0.485
A0A0Q3QSS3	A0A368RB51	A0A0Q3QSS3	A0A368RB51	Uncharacterized protein.	Uncharacterized protein.	0.442
A0A0Q3QSS3	A0A368RDB2	A0A0Q3QSS3	A0A368RDB2	Uncharacterized protein.	ELM2 domain-containing protein.	0.493
A0A0Q3QSS3	A0A368RU21	A0A0Q3QSS3	A0A368RU21	Uncharacterized protein.	Uncharacterized protein.	0.458
A0A0Q3QSS3	A0A368RXX1	A0A0Q3QSS3	A0A368RXX1	Uncharacterized protein.	OVATE domain-containing protein.	0.502
A0A0Q3QSS3	A0A368SNC4	A0A0Q3QSS3	A0A368SNC4	Uncharacterized protein.	Uncharacterized protein.	0.499
A0A0Q3QSS3	K3XEP6_SETIT	A0A0Q3QSS3	K3XEP6	Uncharacterized protein.	Zinc_ribbon_12 domain-containing protein.	0.529
A0A0Q3QSS3	K3XER9_SETIT	A0A0Q3QSS3	K3XER9	Uncharacterized protein.	Uncharacterized protein.	0.527
A0A0Q3QSS3	K3XFU6_SETIT	A0A0Q3QSS3	K3XFU6	Uncharacterized protein.	FRIGIDA-like protein; Belongs to the Frigida family.	0.426
A0A0Q3QSS3	K3XJX8_SETIT	A0A0Q3QSS3	K3XJX8	Uncharacterized protein.	Uncharacterized protein.	0.474
A0A0Q3QSS3	K3XPC9_SETIT	A0A0Q3QSS3	K3XPC9	Uncharacterized protein.	BHLH domain-containing protein.	0.509
A0A0Q3QSS3	K3Y4Q2_SETIT	A0A0Q3QSS3	K3Y4Q2	Uncharacterized protein.	Uncharacterized protein.	0.467
A0A0Q3QSS3	K3Y690_SETIT	A0A0Q3QSS3	K3Y690	Uncharacterized protein.	Uncharacterized protein.	0.519

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