(10 nodes) Group II intron splicing, and APO domain network (Setaria italica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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Others

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co-expression

protein homology

Your Input:
	A0A368RCD8	RNase III domain-containing protein. (529 aa)
	A0A368RE84	NAC domain-containing protein. (297 aa)
	A0A368S8N5	Uncharacterized protein. (884 aa)
	A0A368SQC6	Uncharacterized protein. (688 aa)
	K3XFM3_SETIT	RNase III domain-containing protein. (620 aa)
	K3YSG8_SETIT	Uncharacterized protein. (442 aa)
	K3Z5I8_SETIT	PORR domain-containing protein. (507 aa)
	K3ZHB6_SETIT	Uncharacterized protein. (879 aa)
	K3ZN67_SETIT	Uncharacterized protein. (835 aa)
	K4A6P5_SETIT	Uncharacterized protein. (674 aa)

Your Current Organism:

Setaria italica

NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A368RCD8	A0A368RE84	A0A368RCD8	A0A368RE84	RNase III domain-containing protein.	NAC domain-containing protein.	0.513
A0A368RCD8	A0A368S8N5	A0A368RCD8	A0A368S8N5	RNase III domain-containing protein.	Uncharacterized protein.	0.635
A0A368RCD8	A0A368SQC6	A0A368RCD8	A0A368SQC6	RNase III domain-containing protein.	Uncharacterized protein.	0.546
A0A368RCD8	K3YSG8_SETIT	A0A368RCD8	K3YSG8	RNase III domain-containing protein.	Uncharacterized protein.	0.662
A0A368RCD8	K3Z5I8_SETIT	A0A368RCD8	K3Z5I8	RNase III domain-containing protein.	PORR domain-containing protein.	0.768
A0A368RCD8	K3ZHB6_SETIT	A0A368RCD8	K3ZHB6	RNase III domain-containing protein.	Uncharacterized protein.	0.635
A0A368RCD8	K3ZN67_SETIT	A0A368RCD8	K3ZN67	RNase III domain-containing protein.	Uncharacterized protein.	0.426
A0A368RCD8	K4A6P5_SETIT	A0A368RCD8	K4A6P5	RNase III domain-containing protein.	Uncharacterized protein.	0.546
A0A368RE84	A0A368RCD8	A0A368RE84	A0A368RCD8	NAC domain-containing protein.	RNase III domain-containing protein.	0.513
A0A368RE84	A0A368S8N5	A0A368RE84	A0A368S8N5	NAC domain-containing protein.	Uncharacterized protein.	0.477
A0A368RE84	A0A368SQC6	A0A368RE84	A0A368SQC6	NAC domain-containing protein.	Uncharacterized protein.	0.413
A0A368RE84	K3XFM3_SETIT	A0A368RE84	K3XFM3	NAC domain-containing protein.	RNase III domain-containing protein.	0.513
A0A368RE84	K3YSG8_SETIT	A0A368RE84	K3YSG8	NAC domain-containing protein.	Uncharacterized protein.	0.499
A0A368RE84	K3Z5I8_SETIT	A0A368RE84	K3Z5I8	NAC domain-containing protein.	PORR domain-containing protein.	0.487
A0A368RE84	K3ZHB6_SETIT	A0A368RE84	K3ZHB6	NAC domain-containing protein.	Uncharacterized protein.	0.478
A0A368RE84	K3ZN67_SETIT	A0A368RE84	K3ZN67	NAC domain-containing protein.	Uncharacterized protein.	0.559
A0A368RE84	K4A6P5_SETIT	A0A368RE84	K4A6P5	NAC domain-containing protein.	Uncharacterized protein.	0.414
A0A368S8N5	A0A368RCD8	A0A368S8N5	A0A368RCD8	Uncharacterized protein.	RNase III domain-containing protein.	0.635
A0A368S8N5	A0A368RE84	A0A368S8N5	A0A368RE84	Uncharacterized protein.	NAC domain-containing protein.	0.477
A0A368S8N5	A0A368SQC6	A0A368S8N5	A0A368SQC6	Uncharacterized protein.	Uncharacterized protein.	0.492

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