(41 nodes) FHY3/FAR1 family, and FAR1 DNA binding domain network (Setaria italica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A368PMS7	Uncharacterized protein. (787 aa)
	A0A368Q384	SWIM-type domain-containing protein. (412 aa)
	A0A368QS37	Uncharacterized protein. (241 aa)
	A0A368R621	Uncharacterized protein. (148 aa)
	A0A368R6P6	Uncharacterized protein. (236 aa)
	A0A368RRC1	SWIM-type domain-containing protein. (475 aa)
	A0A368RT16	Uncharacterized protein. (241 aa)
	A0A368S311	SWIM-type domain-containing protein. (575 aa)
	A0A368SFQ9	FAR1 domain-containing protein. (316 aa)
	K3XQ57_SETIT	SWIM-type domain-containing protein. (396 aa)
	K3Y1C8_SETIT	Uncharacterized protein. (600 aa)
	K3Y2Y0_SETIT	SWIM-type domain-containing protein. (449 aa)
	K3YCF8_SETIT	SWIM-type domain-containing protein. (682 aa)
	K3YDJ2_SETIT	SWIM-type domain-containing protein. (672 aa)
	K3YDN6_SETIT	MULE domain-containing protein. (515 aa)
	K3YLN5_SETIT	SWIM-type domain-containing protein. (627 aa)
	K3YN55_SETIT	Uncharacterized protein. (220 aa)
	K3YY80_SETIT	SWIM-type domain-containing protein. (610 aa)
	K3YZV5_SETIT	SWIM-type domain-containing protein. (685 aa)
	K3Z018_SETIT	FAR1 domain-containing protein. (288 aa)
	K3Z424_SETIT	SWIM-type domain-containing protein. (759 aa)
	K3ZCM7_SETIT	SWIM-type domain-containing protein. (446 aa)
	K3ZCW5_SETIT	Uncharacterized protein. (313 aa)
	K3ZE99_SETIT	SWIM-type domain-containing protein. (679 aa)
	K3ZL91_SETIT	Uncharacterized protein. (390 aa)
	K3ZLN2_SETIT	Uncharacterized protein. (391 aa)
	K3ZM81_SETIT	FAR1 domain-containing protein. (255 aa)
	K3ZMS7_SETIT	FAR1 domain-containing protein. (163 aa)
	K3ZNJ8_SETIT	SWIM-type domain-containing protein. (635 aa)
	K3ZV58_SETIT	Dimer_Tnp_hAT domain-containing protein. (329 aa)
	K3ZZ62_SETIT	Uncharacterized protein. (528 aa)
	K3ZZT8_SETIT	Uncharacterized protein. (300 aa)
	K4A0C0_SETIT	Uncharacterized protein. (518 aa)
	K4A129_SETIT	FAR1 domain-containing protein. (232 aa)
	K4A135_SETIT	Uncharacterized protein. (445 aa)
	K4A1D1_SETIT	Uncharacterized protein. (608 aa)
	K4A226_SETIT	SWIM-type domain-containing protein. (688 aa)
	K4AI92_SETIT	Uncharacterized protein. (500 aa)
	K4AIE0_SETIT	SWIM-type domain-containing protein. (691 aa)
	K4AKG1_SETIT	SWIM-type domain-containing protein. (766 aa)
	K4AM20_SETIT	Uncharacterized protein. (374 aa)

Your Current Organism:

Setaria italica

NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A368PMS7	A0A368QS37	A0A368PMS7	A0A368QS37	Uncharacterized protein.	Uncharacterized protein.	0.535
A0A368PMS7	A0A368R621	A0A368PMS7	A0A368R621	Uncharacterized protein.	Uncharacterized protein.	0.522
A0A368PMS7	A0A368R6P6	A0A368PMS7	A0A368R6P6	Uncharacterized protein.	Uncharacterized protein.	0.534
A0A368PMS7	A0A368RT16	A0A368PMS7	A0A368RT16	Uncharacterized protein.	Uncharacterized protein.	0.536
A0A368PMS7	K3YY80_SETIT	A0A368PMS7	K3YY80	Uncharacterized protein.	SWIM-type domain-containing protein.	0.426
A0A368PMS7	K3ZMS7_SETIT	A0A368PMS7	K3ZMS7	Uncharacterized protein.	FAR1 domain-containing protein.	0.457
A0A368PMS7	K3ZV58_SETIT	A0A368PMS7	K3ZV58	Uncharacterized protein.	Dimer_Tnp_hAT domain-containing protein.	0.478
A0A368PMS7	K4AM20_SETIT	A0A368PMS7	K4AM20	Uncharacterized protein.	Uncharacterized protein.	0.535
A0A368Q384	A0A368QS37	A0A368Q384	A0A368QS37	SWIM-type domain-containing protein.	Uncharacterized protein.	0.531
A0A368Q384	A0A368R621	A0A368Q384	A0A368R621	SWIM-type domain-containing protein.	Uncharacterized protein.	0.523
A0A368Q384	A0A368R6P6	A0A368Q384	A0A368R6P6	SWIM-type domain-containing protein.	Uncharacterized protein.	0.533
A0A368Q384	A0A368RRC1	A0A368Q384	A0A368RRC1	SWIM-type domain-containing protein.	SWIM-type domain-containing protein.	0.514
A0A368Q384	A0A368RT16	A0A368Q384	A0A368RT16	SWIM-type domain-containing protein.	Uncharacterized protein.	0.530
A0A368Q384	A0A368S311	A0A368Q384	A0A368S311	SWIM-type domain-containing protein.	SWIM-type domain-containing protein.	0.518
A0A368Q384	K3Y1C8_SETIT	A0A368Q384	K3Y1C8	SWIM-type domain-containing protein.	Uncharacterized protein.	0.483
A0A368Q384	K3YCF8_SETIT	A0A368Q384	K3YCF8	SWIM-type domain-containing protein.	SWIM-type domain-containing protein.	0.520
A0A368Q384	K3YDJ2_SETIT	A0A368Q384	K3YDJ2	SWIM-type domain-containing protein.	SWIM-type domain-containing protein.	0.488
A0A368Q384	K3YDN6_SETIT	A0A368Q384	K3YDN6	SWIM-type domain-containing protein.	MULE domain-containing protein.	0.537
A0A368Q384	K3ZCM7_SETIT	A0A368Q384	K3ZCM7	SWIM-type domain-containing protein.	SWIM-type domain-containing protein.	0.524
A0A368Q384	K3ZL91_SETIT	A0A368Q384	K3ZL91	SWIM-type domain-containing protein.	Uncharacterized protein.	0.526

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