STRINGSTRING
A0A0Q3SK52 A0A0Q3SK52 A0A0Q3VBE7 A0A0Q3VBE7 A0A368PKY7 A0A368PKY7 A0A368PVN1 A0A368PVN1 A0A368PX36 A0A368PX36 A0A368Q0C3 A0A368Q0C3 A0A368Q0U3 A0A368Q0U3 A0A368QIK0 A0A368QIK0 A0A368QIN7 A0A368QIN7 A0A368QIZ2 A0A368QIZ2 A0A368QRF3 A0A368QRF3 A0A368QVZ2 A0A368QVZ2 A0A368R4Q2 A0A368R4Q2 A0A368RE04 A0A368RE04 A0A368RLK6 A0A368RLK6 A0A368RXF5 A0A368RXF5 A0A368S6M2 A0A368S6M2 A0A368SCM1 A0A368SCM1 A0A368SCZ0 A0A368SCZ0 A0A368SEP8 A0A368SEP8 A0A368SJ64 A0A368SJ64 A0A368SS30 A0A368SS30 K3XEN9_SETIT K3XEN9_SETIT K3XGM8_SETIT K3XGM8_SETIT K3XGW3_SETIT K3XGW3_SETIT K3XH66_SETIT K3XH66_SETIT K3XH99_SETIT K3XH99_SETIT K3XKP6_SETIT K3XKP6_SETIT K3XNH6_SETIT K3XNH6_SETIT K3XUQ4_SETIT K3XUQ4_SETIT K3XV15_SETIT K3XV15_SETIT K3XW16_SETIT K3XW16_SETIT K3XW76_SETIT K3XW76_SETIT K3XX44_SETIT K3XX44_SETIT K3XZ09_SETIT K3XZ09_SETIT K3Y570_SETIT K3Y570_SETIT K3Y674_SETIT K3Y674_SETIT K3Y7C3_SETIT K3Y7C3_SETIT K3YAY9_SETIT K3YAY9_SETIT K3YB21_SETIT K3YB21_SETIT K3YBK4_SETIT K3YBK4_SETIT K3YFZ8_SETIT K3YFZ8_SETIT K3YHS3_SETIT K3YHS3_SETIT K3YKH7_SETIT K3YKH7_SETIT K3YLQ6_SETIT K3YLQ6_SETIT K3YME3_SETIT K3YME3_SETIT K3YP71_SETIT K3YP71_SETIT K3YPC2_SETIT K3YPC2_SETIT K3YPD5_SETIT K3YPD5_SETIT K3YR56_SETIT K3YR56_SETIT K3YSL7_SETIT K3YSL7_SETIT K3YT29_SETIT K3YT29_SETIT K3YVG8_SETIT K3YVG8_SETIT K3YWN5_SETIT K3YWN5_SETIT K3YX55_SETIT K3YX55_SETIT K3YXR3_SETIT K3YXR3_SETIT K3Z3C5_SETIT K3Z3C5_SETIT K3Z7L0_SETIT K3Z7L0_SETIT K3ZAY8_SETIT K3ZAY8_SETIT K3ZB21_SETIT K3ZB21_SETIT K3ZCB9_SETIT K3ZCB9_SETIT K3ZHW1_SETIT K3ZHW1_SETIT K3ZKS4_SETIT K3ZKS4_SETIT K3ZMK4_SETIT K3ZMK4_SETIT K3ZQ27_SETIT K3ZQ27_SETIT K3ZQN2_SETIT K3ZQN2_SETIT K3ZRW9_SETIT K3ZRW9_SETIT K3ZSB5_SETIT K3ZSB5_SETIT K3ZW48_SETIT K3ZW48_SETIT K3ZYI2_SETIT K3ZYI2_SETIT K3ZYM4_SETIT K3ZYM4_SETIT K4A4Z3_SETIT K4A4Z3_SETIT K4A578_SETIT K4A578_SETIT K4A5F1_SETIT K4A5F1_SETIT K4A698_SETIT K4A698_SETIT K4A6D4_SETIT K4A6D4_SETIT K4A763_SETIT K4A763_SETIT K4A7M1_SETIT K4A7M1_SETIT K4A7T9_SETIT K4A7T9_SETIT K4A8F7_SETIT K4A8F7_SETIT K4A9P3_SETIT K4A9P3_SETIT K4AB94_SETIT K4AB94_SETIT K4ABU9_SETIT K4ABU9_SETIT K4ACP9_SETIT K4ACP9_SETIT K4ADI2_SETIT K4ADI2_SETIT K4ADJ3_SETIT K4ADJ3_SETIT K4AGE3_SETIT K4AGE3_SETIT K4AGJ3_SETIT K4AGJ3_SETIT K4AHG4_SETIT K4AHG4_SETIT
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A0Q3SK52Uncharacterized protein. (331 aa)
A0A0Q3VBE7Uncharacterized protein. (306 aa)
A0A368PKY7SNRNP27 domain-containing protein. (233 aa)
A0A368PVN1Uncharacterized protein. (134 aa)
A0A368PX36CPSF_A domain-containing protein. (1360 aa)
A0A368Q0C3Uncharacterized protein. (179 aa)
A0A368Q0U3PRP38_assoc domain-containing protein. (385 aa)
A0A368QIK0Uncharacterized protein. (954 aa)
A0A368QIN7RRM domain-containing protein. (193 aa)
A0A368QIZ2U1-type domain-containing protein. (202 aa)
A0A368QRF3MPN domain-containing protein. (2363 aa)
A0A368QVZ2WD_REPEATS_REGION domain-containing protein. (344 aa)
A0A368R4Q2Uncharacterized protein. (390 aa)
A0A368RE04RRM domain-containing protein. (221 aa)
A0A368RLK6Uncharacterized protein. (142 aa)
A0A368RXF5Nop domain-containing protein. (462 aa)
A0A368S6M2Uncharacterized protein. (175 aa)
A0A368SCM1Uncharacterized protein. (870 aa)
A0A368SCZ0RRM domain-containing protein. (130 aa)
A0A368SEP8Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (202 aa)
A0A368SJ64Uncharacterized protein. (1098 aa)
A0A368SS30Uncharacterized protein. (232 aa)
K3XEN9_SETITUncharacterized protein. (796 aa)
K3XGM8_SETITUncharacterized protein. (517 aa)
K3XGW3_SETITMatrin-type domain-containing protein. (503 aa)
K3XH66_SETITNop domain-containing protein. (485 aa)
K3XH99_SETITRRM domain-containing protein. (478 aa)
K3XKP6_SETITWD_REPEATS_REGION domain-containing protein. (287 aa)
K3XNH6_SETITSmall nuclear ribonucleoprotein Sm D2. (104 aa)
K3XUQ4_SETITMPN domain-containing protein. (2351 aa)
K3XV15_SETITTr-type G domain-containing protein. (995 aa)
K3XW16_SETITPSP domain-containing protein. (583 aa)
K3XW76_SETITUncharacterized protein. (548 aa)
K3XX44_SETITWD_REPEATS_REGION domain-containing protein. (426 aa)
K3XZ09_SETITMatrin-type domain-containing protein. (246 aa)
K3Y570_SETITUncharacterized protein. (833 aa)
K3Y674_SETITUncharacterized protein. (567 aa)
K3Y7C3_SETITNop domain-containing protein. (444 aa)
K3YAY9_SETITSmall nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (115 aa)
K3YB21_SETITSmall nuclear ribonucleoprotein Sm D2. (105 aa)
K3YBK4_SETITUncharacterized protein. (56 aa)
K3YFZ8_SETITUncharacterized protein. (1065 aa)
K3YHS3_SETITOCRE domain-containing protein. (430 aa)
K3YKH7_SETITSmall nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (88 aa)
K3YLQ6_SETITUncharacterized protein. (175 aa)
K3YME3_SETITUncharacterized protein. (216 aa)
K3YP71_SETITUncharacterized protein. (2178 aa)
K3YPC2_SETITTOG domain-containing protein. (1278 aa)
K3YPD5_SETITCPSF_A domain-containing protein. (1230 aa)
K3YR56_SETITPSP domain-containing protein. (580 aa)
K3YSL7_SETITMFAP1 domain-containing protein. (430 aa)
K3YT29_SETITUncharacterized protein. (398 aa)
K3YVG8_SETITU1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (230 aa)
K3YWN5_SETITSmall nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (132 aa)
K3YX55_SETITSm domain-containing protein. (91 aa)
K3YXR3_SETITUbiquitin-like domain-containing protein. (80 aa)
K3Z3C5_SETITUncharacterized protein. (1092 aa)
K3Z7L0_SETITU1-type domain-containing protein. (348 aa)
K3ZAY8_SETITUncharacterized protein. (110 aa)
K3ZB21_SETITSmall nuclear ribonucleoprotein Sm D2. (104 aa)
K3ZCB9_SETITUncharacterized protein. (102 aa)
K3ZHW1_SETITUncharacterized protein. (573 aa)
K3ZKS4_SETITUbiquitin-like domain-containing protein. (73 aa)
K3ZMK4_SETITUncharacterized protein. (143 aa)
K3ZQ27_SETITCPSF_A domain-containing protein. (1303 aa)
K3ZQN2_SETITUncharacterized protein. (858 aa)
K3ZRW9_SETITUncharacterized protein. (572 aa)
K3ZSB5_SETITUncharacterized protein. (521 aa)
K3ZW48_SETITSmall nuclear ribonucleoprotein-associated protein. (264 aa)
K3ZYI2_SETITSplicing factor subunit; Belongs to the SF3B5 family. (89 aa)
K3ZYM4_SETITSmall nuclear ribonucleoprotein G. (81 aa)
K4A4Z3_SETITCPSF_A domain-containing protein. (1230 aa)
K4A578_SETITUncharacterized protein. (1049 aa)
K4A5F1_SETITTPR_REGION domain-containing protein. (955 aa)
K4A698_SETITUncharacterized protein; Belongs to the DEAD box helicase family. (744 aa)
K4A6D4_SETITUncharacterized protein. (723 aa)
K4A763_SETITVARLMGL domain-containing protein. (620 aa)
K4A7M1_SETITUncharacterized protein. (578 aa)
K4A7T9_SETITWD_REPEATS_REGION domain-containing protein. (564 aa)
K4A8F7_SETITWD_REPEATS_REGION domain-containing protein. (524 aa)
K4A9P3_SETITUncharacterized protein. (459 aa)
K4AB94_SETITPPIase cyclophilin-type domain-containing protein. (381 aa)
K4ABU9_SETITUncharacterized protein. (356 aa)
K4ACP9_SETITMatrin-type domain-containing protein. (321 aa)
K4ADI2_SETITUncharacterized protein. (282 aa)
K4ADJ3_SETITUncharacterized protein. (279 aa)
K4AGE3_SETITUncharacterized protein. (142 aa)
K4AGJ3_SETITSmall nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (132 aa)
K4AHG4_SETITSmall nuclear ribonucleoprotein G. (80 aa)
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
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