Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| A0A368SCZ0 | K3YAY9_SETIT | A0A368SCZ0 | K3YAY9 | RRM domain-containing protein. | Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. | 0.976 |
| A0A368SCZ0 | K3YKH7_SETIT | A0A368SCZ0 | K3YKH7 | RRM domain-containing protein. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.998 |
| A0A368SCZ0 | K3YPC2_SETIT | A0A368SCZ0 | K3YPC2 | RRM domain-containing protein. | TOG domain-containing protein. | 0.998 |
| A0A368SCZ0 | K3YR56_SETIT | A0A368SCZ0 | K3YR56 | RRM domain-containing protein. | PSP domain-containing protein. | 0.993 |
| A0A368SCZ0 | K3YVG8_SETIT | A0A368SCZ0 | K3YVG8 | RRM domain-containing protein. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.927 |
| A0A368SCZ0 | K3YX55_SETIT | A0A368SCZ0 | K3YX55 | RRM domain-containing protein. | Sm domain-containing protein. | 0.991 |
| A0A368SCZ0 | K3ZAY8_SETIT | A0A368SCZ0 | K3ZAY8 | RRM domain-containing protein. | Uncharacterized protein. | 0.994 |
| A0A368SCZ0 | K3ZB21_SETIT | A0A368SCZ0 | K3ZB21 | RRM domain-containing protein. | Small nuclear ribonucleoprotein Sm D2. | 0.977 |
| A0A368SCZ0 | K3ZW48_SETIT | A0A368SCZ0 | K3ZW48 | RRM domain-containing protein. | Small nuclear ribonucleoprotein-associated protein. | 0.958 |
| A0A368SCZ0 | K3ZYI2_SETIT | A0A368SCZ0 | K3ZYI2 | RRM domain-containing protein. | Splicing factor subunit; Belongs to the SF3B5 family. | 0.997 |
| A0A368SCZ0 | K3ZYM4_SETIT | A0A368SCZ0 | K3ZYM4 | RRM domain-containing protein. | Small nuclear ribonucleoprotein G. | 0.993 |
| A0A368SCZ0 | K4AGJ3_SETIT | A0A368SCZ0 | K4AGJ3 | RRM domain-containing protein. | Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. | 0.978 |
| K3YAY9_SETIT | A0A368SCZ0 | K3YAY9 | A0A368SCZ0 | Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. | RRM domain-containing protein. | 0.976 |
| K3YAY9_SETIT | K3YKH7_SETIT | K3YAY9 | K3YKH7 | Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.998 |
| K3YAY9_SETIT | K3YPC2_SETIT | K3YAY9 | K3YPC2 | Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. | TOG domain-containing protein. | 0.991 |
| K3YAY9_SETIT | K3YR56_SETIT | K3YAY9 | K3YR56 | Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. | PSP domain-containing protein. | 0.982 |
| K3YAY9_SETIT | K3YVG8_SETIT | K3YAY9 | K3YVG8 | Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.994 |
| K3YAY9_SETIT | K3YX55_SETIT | K3YAY9 | K3YX55 | Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. | Sm domain-containing protein. | 0.998 |
| K3YAY9_SETIT | K3ZAY8_SETIT | K3YAY9 | K3ZAY8 | Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. | Uncharacterized protein. | 0.980 |
| K3YAY9_SETIT | K3ZB21_SETIT | K3YAY9 | K3ZB21 | Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. | Small nuclear ribonucleoprotein Sm D2. | 0.993 |
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