16 items (Setaria italica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A368PMN2	Uncharacterized protein. (284 aa)
	A0A368PN04	Uncharacterized protein. (309 aa)
	A0A368PUQ5	Uncharacterized protein. (251 aa)
	A0A368PVA7	Uncharacterized protein. (397 aa)
	A0A368QH11	NOT2_3_5 domain-containing protein. (625 aa)
	A0A368R4T1	RRM domain-containing protein. (733 aa)
	A0A368S5K2	Uncharacterized protein. (452 aa)
	A0A368SX63	Uncharacterized protein. (2447 aa)
	A0A368SXE0	Uncharacterized protein. (678 aa)
	K3Y7C7_SETIT	Uncharacterized protein. (444 aa)
	K3YFW8_SETIT	Uncharacterized protein. (1174 aa)
	K3YFX1_SETIT	Uncharacterized protein. (1170 aa)
	K3YQX1_SETIT	NOT2_3_5 domain-containing protein. (618 aa)
	K3ZQR2_SETIT	Uncharacterized protein. (823 aa)
	K4A4M7_SETIT	Uncharacterized protein. (2431 aa)
	K4A5S2_SETIT	Uncharacterized protein. (858 aa)

Your Current Organism:

Setaria italica

NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A368PMN2	A0A368PN04	A0A368PMN2	A0A368PN04	Uncharacterized protein.	Uncharacterized protein.	0.547
A0A368PMN2	A0A368PUQ5	A0A368PMN2	A0A368PUQ5	Uncharacterized protein.	Uncharacterized protein.	0.580
A0A368PMN2	A0A368PVA7	A0A368PMN2	A0A368PVA7	Uncharacterized protein.	Uncharacterized protein.	0.559
A0A368PMN2	A0A368QH11	A0A368PMN2	A0A368QH11	Uncharacterized protein.	NOT2_3_5 domain-containing protein.	0.933
A0A368PMN2	A0A368R4T1	A0A368PMN2	A0A368R4T1	Uncharacterized protein.	RRM domain-containing protein.	0.901
A0A368PMN2	A0A368S5K2	A0A368PMN2	A0A368S5K2	Uncharacterized protein.	Uncharacterized protein.	0.851
A0A368PMN2	A0A368SX63	A0A368PMN2	A0A368SX63	Uncharacterized protein.	Uncharacterized protein.	0.933
A0A368PMN2	A0A368SXE0	A0A368PMN2	A0A368SXE0	Uncharacterized protein.	Uncharacterized protein.	0.874
A0A368PMN2	K3Y7C7_SETIT	A0A368PMN2	K3Y7C7	Uncharacterized protein.	Uncharacterized protein.	0.851
A0A368PMN2	K3YFW8_SETIT	A0A368PMN2	K3YFW8	Uncharacterized protein.	Uncharacterized protein.	0.901
A0A368PMN2	K3YFX1_SETIT	A0A368PMN2	K3YFX1	Uncharacterized protein.	Uncharacterized protein.	0.901
A0A368PMN2	K3YQX1_SETIT	A0A368PMN2	K3YQX1	Uncharacterized protein.	NOT2_3_5 domain-containing protein.	0.933
A0A368PMN2	K3ZQR2_SETIT	A0A368PMN2	K3ZQR2	Uncharacterized protein.	Uncharacterized protein.	0.898
A0A368PMN2	K4A4M7_SETIT	A0A368PMN2	K4A4M7	Uncharacterized protein.	Uncharacterized protein.	0.933
A0A368PMN2	K4A5S2_SETIT	A0A368PMN2	K4A5S2	Uncharacterized protein.	Uncharacterized protein.	0.969
A0A368PN04	A0A368PMN2	A0A368PN04	A0A368PMN2	Uncharacterized protein.	Uncharacterized protein.	0.547
A0A368PN04	A0A368PUQ5	A0A368PN04	A0A368PUQ5	Uncharacterized protein.	Uncharacterized protein.	0.566
A0A368PN04	A0A368PVA7	A0A368PN04	A0A368PVA7	Uncharacterized protein.	Uncharacterized protein.	0.550
A0A368PN04	A0A368QH11	A0A368PN04	A0A368QH11	Uncharacterized protein.	NOT2_3_5 domain-containing protein.	0.933
A0A368PN04	A0A368R4T1	A0A368PN04	A0A368R4T1	Uncharacterized protein.	RRM domain-containing protein.	0.901

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