11 items (Setaria italica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A368PN04	Uncharacterized protein. (309 aa)
	A0A368QH11	NOT2_3_5 domain-containing protein. (625 aa)
	A0A368R4T1	RRM domain-containing protein. (733 aa)
	A0A368SX63	Uncharacterized protein. (2447 aa)
	K3Y7C7_SETIT	Uncharacterized protein. (444 aa)
	K3YFW8_SETIT	Uncharacterized protein. (1174 aa)
	K3YFX1_SETIT	Uncharacterized protein. (1170 aa)
	K3YQX1_SETIT	NOT2_3_5 domain-containing protein. (618 aa)
	K3ZQR2_SETIT	Uncharacterized protein. (823 aa)
	K4A4M7_SETIT	Uncharacterized protein. (2431 aa)
	K4A5S2_SETIT	Uncharacterized protein. (858 aa)

Your Current Organism:

Setaria italica

NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A368PN04	A0A368QH11	A0A368PN04	A0A368QH11	Uncharacterized protein.	NOT2_3_5 domain-containing protein.	0.933
A0A368PN04	A0A368R4T1	A0A368PN04	A0A368R4T1	Uncharacterized protein.	RRM domain-containing protein.	0.901
A0A368PN04	A0A368SX63	A0A368PN04	A0A368SX63	Uncharacterized protein.	Uncharacterized protein.	0.933
A0A368PN04	K3Y7C7_SETIT	A0A368PN04	K3Y7C7	Uncharacterized protein.	Uncharacterized protein.	0.851
A0A368PN04	K3YFW8_SETIT	A0A368PN04	K3YFW8	Uncharacterized protein.	Uncharacterized protein.	0.901
A0A368PN04	K3YFX1_SETIT	A0A368PN04	K3YFX1	Uncharacterized protein.	Uncharacterized protein.	0.901
A0A368PN04	K3YQX1_SETIT	A0A368PN04	K3YQX1	Uncharacterized protein.	NOT2_3_5 domain-containing protein.	0.933
A0A368PN04	K3ZQR2_SETIT	A0A368PN04	K3ZQR2	Uncharacterized protein.	Uncharacterized protein.	0.898
A0A368PN04	K4A4M7_SETIT	A0A368PN04	K4A4M7	Uncharacterized protein.	Uncharacterized protein.	0.933
A0A368PN04	K4A5S2_SETIT	A0A368PN04	K4A5S2	Uncharacterized protein.	Uncharacterized protein.	0.969
A0A368QH11	A0A368PN04	A0A368QH11	A0A368PN04	NOT2_3_5 domain-containing protein.	Uncharacterized protein.	0.933
A0A368QH11	A0A368R4T1	A0A368QH11	A0A368R4T1	NOT2_3_5 domain-containing protein.	RRM domain-containing protein.	0.950
A0A368QH11	A0A368SX63	A0A368QH11	A0A368SX63	NOT2_3_5 domain-containing protein.	Uncharacterized protein.	0.970
A0A368QH11	K3Y7C7_SETIT	A0A368QH11	K3Y7C7	NOT2_3_5 domain-containing protein.	Uncharacterized protein.	0.929
A0A368QH11	K3YFW8_SETIT	A0A368QH11	K3YFW8	NOT2_3_5 domain-containing protein.	Uncharacterized protein.	0.950
A0A368QH11	K3YFX1_SETIT	A0A368QH11	K3YFX1	NOT2_3_5 domain-containing protein.	Uncharacterized protein.	0.950
A0A368QH11	K3YQX1_SETIT	A0A368QH11	K3YQX1	NOT2_3_5 domain-containing protein.	NOT2_3_5 domain-containing protein.	0.901
A0A368QH11	K3ZQR2_SETIT	A0A368QH11	K3ZQR2	NOT2_3_5 domain-containing protein.	Uncharacterized protein.	0.981
A0A368QH11	K4A4M7_SETIT	A0A368QH11	K4A4M7	NOT2_3_5 domain-containing protein.	Uncharacterized protein.	0.970
A0A368QH11	K4A5S2_SETIT	A0A368QH11	K4A5S2	NOT2_3_5 domain-containing protein.	Uncharacterized protein.	0.992

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