(16 nodes) Mixed, incl. Sterol catabolic process, and Optic atrophy 3-like network (Setaria italica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A368PTC7	Uncharacterized protein. (639 aa)
	A0A368S6P1	Uncharacterized protein. (111 aa)
	K3XHB4_SETIT	Uncharacterized protein. (474 aa)
	K3XMJ8_SETIT	Uncharacterized protein. (170 aa)
	K3YI46_SETIT	RING-type domain-containing protein. (385 aa)
	K3YR00_SETIT	Uncharacterized protein. (603 aa)
	K3YUU4_SETIT	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (277 aa)
	K3YW90_SETIT	Uncharacterized protein. (165 aa)
	K3ZAC0_SETIT	Uncharacterized protein. (162 aa)
	K3ZHT6_SETIT	Chloride channel protein. (597 aa)
	K3ZJQ9_SETIT	Uncharacterized protein. (231 aa)
	K3ZRS3_SETIT	Uncharacterized protein. (591 aa)
	K3ZS69_SETIT	Uncharacterized protein; Belongs to the CTL (choline transporter-like) family. (535 aa)
	K3ZY47_SETIT	t-SNARE coiled-coil homology domain-containing protein. (121 aa)
	K4ADM0_SETIT	RRM domain-containing protein. (276 aa)
	K4AGN9_SETIT	t-SNARE coiled-coil homology domain-containing protein. (124 aa)

Your Current Organism:

Setaria italica

NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A368PTC7	K3ZAC0_SETIT	A0A368PTC7	K3ZAC0	Uncharacterized protein.	Uncharacterized protein.	0.407
A0A368PTC7	K3ZS69_SETIT	A0A368PTC7	K3ZS69	Uncharacterized protein.	Uncharacterized protein; Belongs to the CTL (choline transporter-like) family.	0.406
A0A368PTC7	K4ADM0_SETIT	A0A368PTC7	K4ADM0	Uncharacterized protein.	RRM domain-containing protein.	0.410
A0A368S6P1	K3ZAC0_SETIT	A0A368S6P1	K3ZAC0	Uncharacterized protein.	Uncharacterized protein.	0.473
K3XHB4_SETIT	K3YI46_SETIT	K3XHB4	K3YI46	Uncharacterized protein.	RING-type domain-containing protein.	0.402
K3XHB4_SETIT	K3YUU4_SETIT	K3XHB4	K3YUU4	Uncharacterized protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.401
K3XHB4_SETIT	K3ZAC0_SETIT	K3XHB4	K3ZAC0	Uncharacterized protein.	Uncharacterized protein.	0.407
K3XHB4_SETIT	K3ZS69_SETIT	K3XHB4	K3ZS69	Uncharacterized protein.	Uncharacterized protein; Belongs to the CTL (choline transporter-like) family.	0.407
K3XHB4_SETIT	K4ADM0_SETIT	K3XHB4	K4ADM0	Uncharacterized protein.	RRM domain-containing protein.	0.407
K3XMJ8_SETIT	K3YI46_SETIT	K3XMJ8	K3YI46	Uncharacterized protein.	RING-type domain-containing protein.	0.514
K3XMJ8_SETIT	K3YUU4_SETIT	K3XMJ8	K3YUU4	Uncharacterized protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.412
K3XMJ8_SETIT	K3ZAC0_SETIT	K3XMJ8	K3ZAC0	Uncharacterized protein.	Uncharacterized protein.	0.516
K3XMJ8_SETIT	K3ZS69_SETIT	K3XMJ8	K3ZS69	Uncharacterized protein.	Uncharacterized protein; Belongs to the CTL (choline transporter-like) family.	0.516
K3XMJ8_SETIT	K4ADM0_SETIT	K3XMJ8	K4ADM0	Uncharacterized protein.	RRM domain-containing protein.	0.516
K3YI46_SETIT	K3XHB4_SETIT	K3YI46	K3XHB4	RING-type domain-containing protein.	Uncharacterized protein.	0.402
K3YI46_SETIT	K3XMJ8_SETIT	K3YI46	K3XMJ8	RING-type domain-containing protein.	Uncharacterized protein.	0.514
K3YI46_SETIT	K3YUU4_SETIT	K3YI46	K3YUU4	RING-type domain-containing protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.412
K3YI46_SETIT	K3YW90_SETIT	K3YI46	K3YW90	RING-type domain-containing protein.	Uncharacterized protein.	0.410
K3YI46_SETIT	K3ZAC0_SETIT	K3YI46	K3ZAC0	RING-type domain-containing protein.	Uncharacterized protein.	0.516
K3YI46_SETIT	K3ZS69_SETIT	K3YI46	K3ZS69	RING-type domain-containing protein.	Uncharacterized protein; Belongs to the CTL (choline transporter-like) family.	0.516

page 1 of 4

Server load: medium (66%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About