54 items (Setaria italica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	K4AAP6_SETIT	Methyltransf_11 domain-containing protein. (405 aa)
	K4A8W8_SETIT	Uncharacterized protein. (500 aa)
	A0A368Q0Z0	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. (218 aa)
	A0A368Q3S3	Uncharacterized protein. (118 aa)
	A0A368QA11	Uncharacterized protein. (724 aa)
	A0A368QYP8	Uncharacterized protein. (414 aa)
	A0A368QZ53	Uncharacterized protein. (923 aa)
	A0A368QZB5	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (694 aa)
	A0A368RCK5	Uncharacterized protein. (345 aa)
	A0A368RJB5	Uncharacterized protein. (472 aa)
	A0A368RNL8	Uncharacterized protein. (510 aa)
	A0A368RVW8	Uncharacterized protein. (414 aa)
	A0A368S0Z3	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (597 aa)
	A0A368S4R6	Uncharacterized protein. (853 aa)
	K3XEN7_SETIT	Uncharacterized protein. (797 aa)
	K3XI08_SETIT	Exostosin domain-containing protein; Belongs to the glycosyltransferase 47 family. (430 aa)
	K3XUI0_SETIT	Uncharacterized protein. (75 aa)
	K3XV36_SETIT	Uncharacterized protein. (957 aa)
	K3XW57_SETIT	Uncharacterized protein. (557 aa)
	K3XWY3_SETIT	Uncharacterized protein. (442 aa)
	K4A7H1_SETIT	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (589 aa)
	K3Y0Z2_SETIT	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (347 aa)
	K3Y5R4_SETIT	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (666 aa)
	K3Y5V0_SETIT	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (637 aa)
	K3Y697_SETIT	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (558 aa)
	K3Y8Q6_SETIT	Uncharacterized protein. (323 aa)
	K3YCZ8_SETIT	Uncharacterized protein. (1032 aa)
	K3YGX4_SETIT	Uncharacterized protein. (571 aa)
	K3YHY0_SETIT	Uncharacterized protein. (408 aa)
	K3YIE8_SETIT	Hexosyltransferase; Belongs to the glycosyltransferase 31 family. (346 aa)
	K3YMD4_SETIT	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (668 aa)
	K3YQP0_SETIT	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (661 aa)
	K3YR39_SETIT	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (585 aa)
	K3YVB9_SETIT	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. (242 aa)
	K3YVF3_SETIT	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (233 aa)
	K3YYW1_SETIT	Uncharacterized protein. (574 aa)
	K3Z452_SETIT	Methyltransferase. (737 aa)
	K3Z4H7_SETIT	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (642 aa)
	K3Z4J8_SETIT	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (627 aa)
	K3Z6V9_SETIT	Uncharacterized protein. (391 aa)
	K3Z7Y7_SETIT	Uncharacterized protein. (326 aa)
	K3ZHM8_SETIT	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (666 aa)
	K3ZHV2_SETIT	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (586 aa)
	K3ZN67_SETIT	Uncharacterized protein. (835 aa)
	K3ZN93_SETIT	Methyltransferase. (626 aa)
	K3ZR93_SETIT	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (682 aa)
	K3ZRF7_SETIT	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (643 aa)
	K3ZRL1_SETIT	Methyltransferase. (615 aa)
	K3ZTL7_SETIT	Uncharacterized protein. (420 aa)
	K3ZWF1_SETIT	Uncharacterized protein. (247 aa)
	K4A7B9_SETIT	Methyltransferase. (603 aa)
	K4A794_SETIT	Methyltransferase. (611 aa)
	K3ZWU2_SETIT	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (216 aa)
	K4A6Z3_SETIT	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (637 aa)

Your Current Organism:

Setaria italica

NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A368Q0Z0	K3YVB9_SETIT	A0A368Q0Z0	K3YVB9	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	0.906
A0A368Q0Z0	K3ZWF1_SETIT	A0A368Q0Z0	K3ZWF1	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	Uncharacterized protein.	0.465
A0A368QYP8	A0A368RNL8	A0A368QYP8	A0A368RNL8	Uncharacterized protein.	Uncharacterized protein.	0.422
A0A368QYP8	K3YGX4_SETIT	A0A368QYP8	K3YGX4	Uncharacterized protein.	Uncharacterized protein.	0.422
A0A368QYP8	K3Z4H7_SETIT	A0A368QYP8	K3Z4H7	Uncharacterized protein.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.520
A0A368RNL8	A0A368QYP8	A0A368RNL8	A0A368QYP8	Uncharacterized protein.	Uncharacterized protein.	0.422
A0A368RNL8	K3XWY3_SETIT	A0A368RNL8	K3XWY3	Uncharacterized protein.	Uncharacterized protein.	0.422
A0A368RNL8	K3Z4H7_SETIT	A0A368RNL8	K3Z4H7	Uncharacterized protein.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.410
K3XWY3_SETIT	A0A368RNL8	K3XWY3	A0A368RNL8	Uncharacterized protein.	Uncharacterized protein.	0.422
K3XWY3_SETIT	K3YGX4_SETIT	K3XWY3	K3YGX4	Uncharacterized protein.	Uncharacterized protein.	0.422
K3XWY3_SETIT	K3Z4H7_SETIT	K3XWY3	K3Z4H7	Uncharacterized protein.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.520
K3Y5V0_SETIT	K3YIE8_SETIT	K3Y5V0	K3YIE8	Hexosyltransferase; Belongs to the glycosyltransferase 8 family.	Hexosyltransferase; Belongs to the glycosyltransferase 31 family.	0.430
K3YGX4_SETIT	A0A368QYP8	K3YGX4	A0A368QYP8	Uncharacterized protein.	Uncharacterized protein.	0.422
K3YGX4_SETIT	K3XWY3_SETIT	K3YGX4	K3XWY3	Uncharacterized protein.	Uncharacterized protein.	0.422
K3YGX4_SETIT	K3Z4H7_SETIT	K3YGX4	K3Z4H7	Uncharacterized protein.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.410
K3YIE8_SETIT	K3Y5V0_SETIT	K3YIE8	K3Y5V0	Hexosyltransferase; Belongs to the glycosyltransferase 31 family.	Hexosyltransferase; Belongs to the glycosyltransferase 8 family.	0.430
K3YVB9_SETIT	A0A368Q0Z0	K3YVB9	A0A368Q0Z0	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	0.906
K3YVB9_SETIT	K3ZWF1_SETIT	K3YVB9	K3ZWF1	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	Uncharacterized protein.	0.465
K3YVF3_SETIT	K3ZWU2_SETIT	K3YVF3	K3ZWU2	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.775
K3YYW1_SETIT	K3Z452_SETIT	K3YYW1	K3Z452	Uncharacterized protein.	Methyltransferase.	0.402

page 1 of 2

Server load: low (18%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About