(65 nodes) Histone deacetylation network (Setaria italica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A368RHG5	Uncharacterized protein. (117 aa)
	A0A368PGS1	Uncharacterized protein. (382 aa)
	A0A368PX87	RanBP2-type domain-containing protein. (631 aa)
	A0A368Q7P5	Hist_deacetyl domain-containing protein. (771 aa)
	A0A368Q9D6	Hist_deacetyl domain-containing protein. (146 aa)
	A0A368QBV9	Uncharacterized protein. (1708 aa)
	A0A368QEC0	Hist_deacetyl domain-containing protein. (309 aa)
	A0A368QEG8	HDAC_interact domain-containing protein. (902 aa)
	A0A368QLU4	Uncharacterized protein. (534 aa)
	A0A368QSZ0	Uncharacterized protein. (124 aa)
	A0A368R2L9	HDAC_interact domain-containing protein. (1442 aa)
	A0A368R426	Tudor domain-containing protein. (1304 aa)
	A0A368R6B3	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (404 aa)
	A0A368RH14	Uncharacterized protein. (116 aa)
	A0A368RH17	Uncharacterized protein. (131 aa)
	A0A368RH19	Uncharacterized protein. (108 aa)
	A0A368RH92	Uncharacterized protein. (108 aa)
	A0A368RRQ9	SANT domain-containing protein. (1179 aa)
	A0A368S0N5	Hist_deacetyl domain-containing protein. (444 aa)
	A0A368S9B5	Uncharacterized protein. (204 aa)
	A0A368S9B8	Uncharacterized protein. (225 aa)
	A0A368S9L7	Uncharacterized protein. (204 aa)
	A0A368SB20	Uncharacterized protein. (207 aa)
	A0A368SD46	SANT domain-containing protein. (453 aa)
	A0A368SHG7	LisH domain-containing protein. (401 aa)
	A0A368SJC0	Hist_deacetyl domain-containing protein. (51 aa)
	A0A368SJX4	ARID domain-containing protein. (310 aa)
	A0A368SK10	ARID domain-containing protein. (504 aa)
	K3XDR7_SETIT	Tudor domain-containing protein. (1528 aa)
	K3XDT4_SETIT	HDAC_interact domain-containing protein. (1411 aa)
	K3XN34_SETIT	Uncharacterized protein. (137 aa)
	K3XPJ9_SETIT	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (410 aa)
	K3XSD6_SETIT	Uncharacterized protein. (466 aa)
	K3XSY1_SETIT	Uncharacterized protein. (137 aa)
	K3XVC9_SETIT	Uncharacterized protein. (796 aa)
	K3XWD5_SETIT	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (518 aa)
	K3XXX6_SETIT	Hist_deacetyl domain-containing protein. (351 aa)
	K3Y074_SETIT	Uncharacterized protein. (108 aa)
	K3Y699_SETIT	Uncharacterized protein. (557 aa)
	K3Y7H6_SETIT	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (430 aa)
	K3Y7I0_SETIT	Hist_deacetyl domain-containing protein. (429 aa)
	K3YDN4_SETIT	Uncharacterized protein. (514 aa)
	K3YHJ1_SETIT	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (458 aa)
	K3YJW2_SETIT	Uncharacterized protein. (172 aa)
	K3YKD1_SETIT	Uncharacterized protein. (108 aa)
	K3YKE8_SETIT	Uncharacterized protein. (100 aa)
	K3YPU8_SETIT	SWIRM domain-containing protein. (866 aa)
	K3YRL4_SETIT	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (522 aa)
	K3YT09_SETIT	Uncharacterized protein. (402 aa)
	K3Z083_SETIT	Protein kinase domain-containing protein. (99 aa)
	K3Z335_SETIT	Uncharacterized protein. (1741 aa)
	K3Z361_SETIT	HDAC_interact domain-containing protein. (1357 aa)
	K3Z9Q1_SETIT	Uncharacterized protein. (204 aa)
	K3ZA20_SETIT	UBP-type domain-containing protein. (182 aa)
	K3ZBW8_SETIT	Uncharacterized protein. (540 aa)
	K3ZC96_SETIT	Uncharacterized protein. (134 aa)
	K3ZDD1_SETIT	HDAC_interact domain-containing protein. (850 aa)
	K3ZJP2_SETIT	Uncharacterized protein. (240 aa)
	K3ZLT4_SETIT	Uncharacterized protein. (203 aa)
	K3ZN47_SETIT	Uncharacterized protein. (194 aa)
	K3ZR61_SETIT	Hist_deacetyl domain-containing protein. (704 aa)
	K3ZRG4_SETIT	RanBP2-type domain-containing protein. (638 aa)
	K4AI28_SETIT	ARID domain-containing protein. (274 aa)
	K4AIQ9_SETIT	Uncharacterized protein. (205 aa)
	K4AJI4_SETIT	Uncharacterized protein. (244 aa)

Your Current Organism:

Setaria italica

NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A368PGS1	A0A368QBV9	A0A368PGS1	A0A368QBV9	Uncharacterized protein.	Uncharacterized protein.	0.607
A0A368PGS1	A0A368QEG8	A0A368PGS1	A0A368QEG8	Uncharacterized protein.	HDAC_interact domain-containing protein.	0.422
A0A368PGS1	A0A368QLU4	A0A368PGS1	A0A368QLU4	Uncharacterized protein.	Uncharacterized protein.	0.422
A0A368PGS1	A0A368QSZ0	A0A368PGS1	A0A368QSZ0	Uncharacterized protein.	Uncharacterized protein.	0.422
A0A368PGS1	A0A368R2L9	A0A368PGS1	A0A368R2L9	Uncharacterized protein.	HDAC_interact domain-containing protein.	0.422
A0A368PGS1	A0A368RH14	A0A368PGS1	A0A368RH14	Uncharacterized protein.	Uncharacterized protein.	0.422
A0A368PGS1	A0A368RH17	A0A368PGS1	A0A368RH17	Uncharacterized protein.	Uncharacterized protein.	0.422
A0A368PGS1	A0A368RH19	A0A368PGS1	A0A368RH19	Uncharacterized protein.	Uncharacterized protein.	0.422
A0A368PGS1	A0A368RH92	A0A368PGS1	A0A368RH92	Uncharacterized protein.	Uncharacterized protein.	0.422
A0A368PGS1	A0A368RHG5	A0A368PGS1	A0A368RHG5	Uncharacterized protein.	Uncharacterized protein.	0.422
A0A368PGS1	A0A368RRQ9	A0A368PGS1	A0A368RRQ9	Uncharacterized protein.	SANT domain-containing protein.	0.607
A0A368PGS1	A0A368S9B5	A0A368PGS1	A0A368S9B5	Uncharacterized protein.	Uncharacterized protein.	0.422
A0A368PGS1	A0A368S9B8	A0A368PGS1	A0A368S9B8	Uncharacterized protein.	Uncharacterized protein.	0.422
A0A368PGS1	A0A368S9L7	A0A368PGS1	A0A368S9L7	Uncharacterized protein.	Uncharacterized protein.	0.422
A0A368PGS1	A0A368SB20	A0A368PGS1	A0A368SB20	Uncharacterized protein.	Uncharacterized protein.	0.422
A0A368PGS1	A0A368SD46	A0A368PGS1	A0A368SD46	Uncharacterized protein.	SANT domain-containing protein.	0.607
A0A368PGS1	A0A368SHG7	A0A368PGS1	A0A368SHG7	Uncharacterized protein.	LisH domain-containing protein.	0.583
A0A368PGS1	K3XDT4_SETIT	A0A368PGS1	K3XDT4	Uncharacterized protein.	HDAC_interact domain-containing protein.	0.422
A0A368PGS1	K3XN34_SETIT	A0A368PGS1	K3XN34	Uncharacterized protein.	Uncharacterized protein.	0.422
A0A368PGS1	K3XSY1_SETIT	A0A368PGS1	K3XSY1	Uncharacterized protein.	Uncharacterized protein.	0.422

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