(30 nodes) Syntaxin binding network (Setaria italica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A368PPC7	Uncharacterized protein. (249 aa)
	A0A368PPQ7	Uncharacterized protein. (214 aa)
	A0A368Q811	Uncharacterized protein. (420 aa)
	A0A368QA14	V-SNARE coiled-coil homology domain-containing protein. (1107 aa)
	A0A368QRZ2	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (611 aa)
	A0A368RT87	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (739 aa)
	A0A368RZ47	Uncharacterized protein. (296 aa)
	A0A368SIY2	Uncharacterized protein. (689 aa)
	A0A368SKI2	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (645 aa)
	A0A368SSB6	Uncharacterized protein. (129 aa)
	K3XVR6_SETIT	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (655 aa)
	K3Y4V5_SETIT	Lgl_C domain-containing protein. (1026 aa)
	K3Y4X2_SETIT	Vps54 domain-containing protein. (991 aa)
	K3Y7A1_SETIT	Uncharacterized protein. (448 aa)
	K3YA66_SETIT	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (196 aa)
	K3YBP4_SETIT	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (43 aa)
	K3YFL4_SETIT	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (282 aa)
	K3YIX0_SETIT	Uncharacterized protein. (289 aa)
	K3YQP2_SETIT	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (660 aa)
	K3YY73_SETIT	Uncharacterized protein. (222 aa)
	K3YZC3_SETIT	Uncharacterized protein. (151 aa)
	K3ZHC1_SETIT	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (858 aa)
	K3ZQ80_SETIT	V-SNARE coiled-coil homology domain-containing protein. (1095 aa)
	K3ZUC4_SETIT	Uncharacterized protein. (374 aa)
	K4A6H7_SETIT	Uncharacterized protein. (700 aa)
	K4A745_SETIT	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (623 aa)
	K4AAD8_SETIT	Uncharacterized protein. (423 aa)
	K4ADD2_SETIT	Uncharacterized protein. (289 aa)
	K4AIJ1_SETIT	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (666 aa)
	K4AJZ1_SETIT	Uncharacterized protein. (645 aa)

Your Current Organism:

Setaria italica

NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A368PPC7	A0A368PPQ7	A0A368PPC7	A0A368PPQ7	Uncharacterized protein.	Uncharacterized protein.	0.540
A0A368PPC7	A0A368Q811	A0A368PPC7	A0A368Q811	Uncharacterized protein.	Uncharacterized protein.	0.690
A0A368PPC7	A0A368RZ47	A0A368PPC7	A0A368RZ47	Uncharacterized protein.	Uncharacterized protein.	0.926
A0A368PPC7	K3Y7A1_SETIT	A0A368PPC7	K3Y7A1	Uncharacterized protein.	Uncharacterized protein.	0.847
A0A368PPC7	K3YIX0_SETIT	A0A368PPC7	K3YIX0	Uncharacterized protein.	Uncharacterized protein.	0.540
A0A368PPC7	K3ZUC4_SETIT	A0A368PPC7	K3ZUC4	Uncharacterized protein.	Uncharacterized protein.	0.690
A0A368PPC7	K4A745_SETIT	A0A368PPC7	K4A745	Uncharacterized protein.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.954
A0A368PPC7	K4ADD2_SETIT	A0A368PPC7	K4ADD2	Uncharacterized protein.	Uncharacterized protein.	0.540
A0A368PPQ7	A0A368PPC7	A0A368PPQ7	A0A368PPC7	Uncharacterized protein.	Uncharacterized protein.	0.540
A0A368PPQ7	A0A368Q811	A0A368PPQ7	A0A368Q811	Uncharacterized protein.	Uncharacterized protein.	0.690
A0A368PPQ7	A0A368RZ47	A0A368PPQ7	A0A368RZ47	Uncharacterized protein.	Uncharacterized protein.	0.926
A0A368PPQ7	K3Y7A1_SETIT	A0A368PPQ7	K3Y7A1	Uncharacterized protein.	Uncharacterized protein.	0.847
A0A368PPQ7	K3YIX0_SETIT	A0A368PPQ7	K3YIX0	Uncharacterized protein.	Uncharacterized protein.	0.540
A0A368PPQ7	K3ZUC4_SETIT	A0A368PPQ7	K3ZUC4	Uncharacterized protein.	Uncharacterized protein.	0.690
A0A368PPQ7	K4A745_SETIT	A0A368PPQ7	K4A745	Uncharacterized protein.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.954
A0A368PPQ7	K4ADD2_SETIT	A0A368PPQ7	K4ADD2	Uncharacterized protein.	Uncharacterized protein.	0.540
A0A368Q811	A0A368PPC7	A0A368Q811	A0A368PPC7	Uncharacterized protein.	Uncharacterized protein.	0.690
A0A368Q811	A0A368PPQ7	A0A368Q811	A0A368PPQ7	Uncharacterized protein.	Uncharacterized protein.	0.690
A0A368Q811	A0A368QA14	A0A368Q811	A0A368QA14	Uncharacterized protein.	V-SNARE coiled-coil homology domain-containing protein.	0.460
A0A368Q811	A0A368QRZ2	A0A368Q811	A0A368QRZ2	Uncharacterized protein.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.745

page 1 of 8

Server load: low (30%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About