(16 nodes) Proteasome-activating activity network (Setaria italica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	K3YSN2_SETIT	AAA domain-containing protein; Belongs to the AAA ATPase family. (428 aa)
	K3YSP1_SETIT	AAA domain-containing protein; Belongs to the AAA ATPase family. (426 aa)
	K3YSR8_SETIT	AAA domain-containing protein; Belongs to the AAA ATPase family. (422 aa)
	K3YSS9_SETIT	AAA domain-containing protein; Belongs to the AAA ATPase family. (420 aa)
	K3ZTA6_SETIT	AAA domain-containing protein; Belongs to the AAA ATPase family. (447 aa)
	K4A0U4_SETIT	AAA domain-containing protein; Belongs to the AAA ATPase family. (484 aa)
	K4AAG0_SETIT	AAA domain-containing protein; Belongs to the AAA ATPase family. (418 aa)
	K4A9X8_SETIT	AAA domain-containing protein; Belongs to the AAA ATPase family. (447 aa)
	A0A368PH61	AAA domain-containing protein; Belongs to the AAA ATPase family. (400 aa)
	A0A368PR83	AAA domain-containing protein; Belongs to the AAA ATPase family. (595 aa)
	A0A368PYJ2	AAA domain-containing protein; Belongs to the AAA ATPase family. (373 aa)
	K3XX30_SETIT	AAA domain-containing protein; Belongs to the AAA ATPase family. (430 aa)
	K3XX43_SETIT	AAA domain-containing protein; Belongs to the AAA ATPase family. (426 aa)
	K3XX65_SETIT	AAA domain-containing protein; Belongs to the AAA ATPase family. (420 aa)
	K3XXD9_SETIT	AAA domain-containing protein; Belongs to the AAA ATPase family. (398 aa)
	K3YSD0_SETIT	AAA domain-containing protein; Belongs to the AAA ATPase family. (454 aa)

Your Current Organism:

Setaria italica

NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A368PH61	A0A368PR83	A0A368PH61	A0A368PR83	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.711
A0A368PH61	A0A368PYJ2	A0A368PH61	A0A368PYJ2	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.942
A0A368PH61	K3XX30_SETIT	A0A368PH61	K3XX30	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.977
A0A368PH61	K3XX43_SETIT	A0A368PH61	K3XX43	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.975
A0A368PH61	K3XX65_SETIT	A0A368PH61	K3XX65	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.970
A0A368PH61	K3XXD9_SETIT	A0A368PH61	K3XXD9	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.900
A0A368PH61	K3YSN2_SETIT	A0A368PH61	K3YSN2	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.977
A0A368PH61	K3YSP1_SETIT	A0A368PH61	K3YSP1	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.975
A0A368PH61	K3YSR8_SETIT	A0A368PH61	K3YSR8	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.970
A0A368PH61	K3YSS9_SETIT	A0A368PH61	K3YSS9	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.941
A0A368PH61	K3ZTA6_SETIT	A0A368PH61	K3ZTA6	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.980
A0A368PH61	K4A0U4_SETIT	A0A368PH61	K4A0U4	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.880
A0A368PH61	K4A9X8_SETIT	A0A368PH61	K4A9X8	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.980
A0A368PH61	K4AAG0_SETIT	A0A368PH61	K4AAG0	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.941
A0A368PR83	A0A368PH61	A0A368PR83	A0A368PH61	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.711
A0A368PR83	A0A368PYJ2	A0A368PR83	A0A368PYJ2	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.789
A0A368PR83	K3XX30_SETIT	A0A368PR83	K3XX30	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.830
A0A368PR83	K3XX43_SETIT	A0A368PR83	K3XX43	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.814
A0A368PR83	K3XX65_SETIT	A0A368PR83	K3XX65	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.827
A0A368PR83	K3XXD9_SETIT	A0A368PR83	K3XXD9	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.712

page 1 of 12

Server load: low (16%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About