(34 nodes) Retrograde transport, endosome to Golgi network (Setaria italica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	K3YWL8_SETIT	Uncharacterized protein. (135 aa)
	A0A368PUQ3	DAO domain-containing protein. (398 aa)
	A0A368Q711	WPP domain-containing protein. (164 aa)
	A0A368Q7X4	Uncharacterized protein. (238 aa)
	A0A368QAV5	Uncharacterized protein. (341 aa)
	A0A368RF08	Vps53_N domain-containing protein. (838 aa)
	A0A368S7T9	Uncharacterized protein. (426 aa)
	A0A368SFJ5	WASH_WAHD domain-containing protein. (210 aa)
	A0A368SIY2	Uncharacterized protein. (689 aa)
	K3XEN6_SETIT	Vps53_N domain-containing protein. (798 aa)
	K3XUV1_SETIT	Foie-gras_1 domain-containing protein. (1240 aa)
	K3Y4X2_SETIT	Vps54 domain-containing protein. (991 aa)
	K3YPF9_SETIT	RIC1 domain-containing protein. (1124 aa)
	K3YVY1_SETIT	Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family. (189 aa)
	K3Z8A5_SETIT	Uncharacterized protein. (304 aa)
	K3ZI49_SETIT	Uncharacterized protein. (506 aa)
	K3ZSA1_SETIT	DAO domain-containing protein. (527 aa)
	K3ZSC5_SETIT	Uncharacterized protein. (519 aa)
	K3ZTT4_SETIT	Uncharacterized protein. (408 aa)
	K3ZWJ6_SETIT	WPP domain-containing protein. (238 aa)
	K3ZWY3_SETIT	Uncharacterized protein. (208 aa)
	K3ZXX8_SETIT	Uncharacterized protein. (140 aa)
	K4A018_SETIT	Uncharacterized protein. (203 aa)
	K4A560_SETIT	Uncharacterized protein. (1083 aa)
	K4A602_SETIT	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (803 aa)
	K4A634_SETIT	Uncharacterized protein. (771 aa)
	K4A6H7_SETIT	Uncharacterized protein. (700 aa)
	K4A824_SETIT	Uncharacterized protein. (547 aa)
	K4A8X3_SETIT	Uncharacterized protein. (499 aa)
	K4A9N3_SETIT	Uncharacterized protein. (461 aa)
	K4AF14_SETIT	Uncharacterized protein. (214 aa)
	K4AGE7_SETIT	Uncharacterized protein. (140 aa)
	K4AHE6_SETIT	Uncharacterized protein. (81 aa)
	K4AJZ1_SETIT	Uncharacterized protein. (645 aa)

Your Current Organism:

Setaria italica

NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A368Q7X4	A0A368QAV5	A0A368Q7X4	A0A368QAV5	Uncharacterized protein.	Uncharacterized protein.	0.747
A0A368Q7X4	A0A368RF08	A0A368Q7X4	A0A368RF08	Uncharacterized protein.	Vps53_N domain-containing protein.	0.804
A0A368Q7X4	A0A368SIY2	A0A368Q7X4	A0A368SIY2	Uncharacterized protein.	Uncharacterized protein.	0.779
A0A368Q7X4	K3XEN6_SETIT	A0A368Q7X4	K3XEN6	Uncharacterized protein.	Vps53_N domain-containing protein.	0.804
A0A368Q7X4	K3Y4X2_SETIT	A0A368Q7X4	K3Y4X2	Uncharacterized protein.	Vps54 domain-containing protein.	0.816
A0A368Q7X4	K3YPF9_SETIT	A0A368Q7X4	K3YPF9	Uncharacterized protein.	RIC1 domain-containing protein.	0.949
A0A368Q7X4	K3YVY1_SETIT	A0A368Q7X4	K3YVY1	Uncharacterized protein.	Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.	0.443
A0A368Q7X4	K3Z8A5_SETIT	A0A368Q7X4	K3Z8A5	Uncharacterized protein.	Uncharacterized protein.	0.550
A0A368Q7X4	K4A602_SETIT	A0A368Q7X4	K4A602	Uncharacterized protein.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.522
A0A368Q7X4	K4A634_SETIT	A0A368Q7X4	K4A634	Uncharacterized protein.	Uncharacterized protein.	0.732
A0A368Q7X4	K4A6H7_SETIT	A0A368Q7X4	K4A6H7	Uncharacterized protein.	Uncharacterized protein.	0.779
A0A368Q7X4	K4A824_SETIT	A0A368Q7X4	K4A824	Uncharacterized protein.	Uncharacterized protein.	0.747
A0A368Q7X4	K4A9N3_SETIT	A0A368Q7X4	K4A9N3	Uncharacterized protein.	Uncharacterized protein.	0.522
A0A368Q7X4	K4AJZ1_SETIT	A0A368Q7X4	K4AJZ1	Uncharacterized protein.	Uncharacterized protein.	0.779
A0A368QAV5	A0A368Q7X4	A0A368QAV5	A0A368Q7X4	Uncharacterized protein.	Uncharacterized protein.	0.747
A0A368QAV5	A0A368RF08	A0A368QAV5	A0A368RF08	Uncharacterized protein.	Vps53_N domain-containing protein.	0.762
A0A368QAV5	A0A368SIY2	A0A368QAV5	A0A368SIY2	Uncharacterized protein.	Uncharacterized protein.	0.687
A0A368QAV5	K3XEN6_SETIT	A0A368QAV5	K3XEN6	Uncharacterized protein.	Vps53_N domain-containing protein.	0.762
A0A368QAV5	K3Y4X2_SETIT	A0A368QAV5	K3Y4X2	Uncharacterized protein.	Vps54 domain-containing protein.	0.806
A0A368QAV5	K3YPF9_SETIT	A0A368QAV5	K3YPF9	Uncharacterized protein.	RIC1 domain-containing protein.	0.980

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