30 items (Setaria italica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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Predicted Interactions

gene neighborhood

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Others

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Your Input:
	A0A368PNA6	Nuclear cap-binding protein subunit 2. (242 aa)
	A0A368PUG3	Uncharacterized protein. (261 aa)
	A0A368RL61	Uncharacterized protein. (1176 aa)
	A0A368RQM7	Uncharacterized protein. (218 aa)
	K3XE96_SETIT	Uncharacterized protein. (939 aa)
	K3XEN9_SETIT	Uncharacterized protein. (796 aa)
	K3XXH7_SETIT	Uncharacterized protein. (388 aa)
	K3XZ42_SETIT	Uncharacterized protein. (234 aa)
	K3Y570_SETIT	Uncharacterized protein. (833 aa)
	K3Y8A5_SETIT	Uncharacterized protein. (358 aa)
	K3YC24_SETIT	Cactin_mid domain-containing protein. (306 aa)
	K3YG19_SETIT	Uncharacterized protein. (1005 aa)
	K3YQ11_SETIT	LAGLIDADG_2 domain-containing protein. (793 aa)
	K3YVG8_SETIT	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (230 aa)
	K3YYA2_SETIT	Nuclear cap-binding protein subunit 2. (281 aa)
	K3Z3L3_SETIT	Protein kinase domain-containing protein. (934 aa)
	K3ZQD8_SETIT	Uncharacterized protein. (983 aa)
	K3ZSB5_SETIT	Uncharacterized protein. (521 aa)
	K4A635_SETIT	Uncharacterized protein. (771 aa)
	K4A6Q4_SETIT	Uncharacterized protein. (670 aa)
	K4A7M1_SETIT	Uncharacterized protein. (578 aa)
	K4A9C0_SETIT	Protein kinase domain-containing protein. (477 aa)
	K4AC87_SETIT	J domain-containing protein. (338 aa)
	K4AEN0_SETIT	Uncharacterized protein. (230 aa)
	K4AEW5_SETIT	Uncharacterized protein. (221 aa)
	A0A368RXL4	Cactin_mid domain-containing protein. (199 aa)
	A0A368SFM1	Protein kinase domain-containing protein. (562 aa)
	A0A368SSS5	J domain-containing protein. (246 aa)
	A0A368SVP4	Uncharacterized protein. (111 aa)
	A0A368SW01	Uncharacterized protein. (949 aa)

Your Current Organism:

Setaria italica

NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A368PNA6	A0A368RL61	A0A368PNA6	A0A368RL61	Nuclear cap-binding protein subunit 2.	Uncharacterized protein.	0.663
A0A368PNA6	A0A368SVP4	A0A368PNA6	A0A368SVP4	Nuclear cap-binding protein subunit 2.	Uncharacterized protein.	0.663
A0A368PNA6	A0A368SW01	A0A368PNA6	A0A368SW01	Nuclear cap-binding protein subunit 2.	Uncharacterized protein.	0.736
A0A368PNA6	K3XEN9_SETIT	A0A368PNA6	K3XEN9	Nuclear cap-binding protein subunit 2.	Uncharacterized protein.	0.736
A0A368PNA6	K3XZ42_SETIT	A0A368PNA6	K3XZ42	Nuclear cap-binding protein subunit 2.	Uncharacterized protein.	0.882
A0A368PNA6	K3Y570_SETIT	A0A368PNA6	K3Y570	Nuclear cap-binding protein subunit 2.	Uncharacterized protein.	0.749
A0A368PNA6	K3YG19_SETIT	A0A368PNA6	K3YG19	Nuclear cap-binding protein subunit 2.	Uncharacterized protein.	0.663
A0A368PNA6	K3YVG8_SETIT	A0A368PNA6	K3YVG8	Nuclear cap-binding protein subunit 2.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	0.935
A0A368PNA6	K3ZQD8_SETIT	A0A368PNA6	K3ZQD8	Nuclear cap-binding protein subunit 2.	Uncharacterized protein.	0.765
A0A368PNA6	K3ZSB5_SETIT	A0A368PNA6	K3ZSB5	Nuclear cap-binding protein subunit 2.	Uncharacterized protein.	0.738
A0A368PNA6	K4A635_SETIT	A0A368PNA6	K4A635	Nuclear cap-binding protein subunit 2.	Uncharacterized protein.	0.663
A0A368PNA6	K4A7M1_SETIT	A0A368PNA6	K4A7M1	Nuclear cap-binding protein subunit 2.	Uncharacterized protein.	0.736
A0A368PUG3	K3Y570_SETIT	A0A368PUG3	K3Y570	Uncharacterized protein.	Uncharacterized protein.	0.788
A0A368PUG3	K3YVG8_SETIT	A0A368PUG3	K3YVG8	Uncharacterized protein.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	0.596
A0A368RL61	A0A368PNA6	A0A368RL61	A0A368PNA6	Uncharacterized protein.	Nuclear cap-binding protein subunit 2.	0.663
A0A368RL61	A0A368SVP4	A0A368RL61	A0A368SVP4	Uncharacterized protein.	Uncharacterized protein.	0.566
A0A368RL61	K3XEN9_SETIT	A0A368RL61	K3XEN9	Uncharacterized protein.	Uncharacterized protein.	0.707
A0A368RL61	K3Y570_SETIT	A0A368RL61	K3Y570	Uncharacterized protein.	Uncharacterized protein.	0.788
A0A368RL61	K3YVG8_SETIT	A0A368RL61	K3YVG8	Uncharacterized protein.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	0.943
A0A368RL61	K3YYA2_SETIT	A0A368RL61	K3YYA2	Uncharacterized protein.	Nuclear cap-binding protein subunit 2.	0.663

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