(32 nodes) Regulation of vesicle-mediated transport network (Setaria italica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

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protein homology

Your Input:
	K3ZIR6_SETIT	WD_REPEATS_REGION domain-containing protein. (393 aa)
	K3ZHB0_SETIT	Uncharacterized protein. (891 aa)
	K3Z9V6_SETIT	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. (193 aa)
	K3Z9K2_SETIT	Uncharacterized protein. (214 aa)
	K3Z482_SETIT	Uncharacterized protein; Belongs to the CTL (choline transporter-like) family. (710 aa)
	K3Z3N2_SETIT	Uncharacterized protein. (908 aa)
	K3YQ16_SETIT	Uncharacterized protein. (787 aa)
	K3YK18_SETIT	Uncharacterized protein. (149 aa)
	K3YGH6_SETIT	Uncharacterized protein; Belongs to the CTL (choline transporter-like) family. (701 aa)
	K3Y4V5_SETIT	Lgl_C domain-containing protein. (1026 aa)
	K3XM88_SETIT	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. (193 aa)
	K3XM83_SETIT	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. (193 aa)
	K3XLW2_SETIT	Uncharacterized protein. (214 aa)
	K3XE83_SETIT	Uncharacterized protein. (954 aa)
	A0A368SSB6	Uncharacterized protein. (129 aa)
	A0A368RLU3	IPPc domain-containing protein. (383 aa)
	A0A368RJ99	Uncharacterized protein. (154 aa)
	A0A368QA14	V-SNARE coiled-coil homology domain-containing protein. (1107 aa)
	A0A368Q9C8	Uncharacterized protein. (820 aa)
	A0A368Q150	IPPc domain-containing protein. (438 aa)
	K4AF16_SETIT	Uncharacterized protein. (214 aa)
	K4ABM4_SETIT	WD_REPEATS_REGION domain-containing protein. (367 aa)
	K4A9K0_SETIT	IPPc domain-containing protein. (465 aa)
	K4A7R9_SETIT	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (567 aa)
	K4A4M6_SETIT	J domain-containing protein. (2580 aa)
	K3ZZW6_SETIT	Uncharacterized protein. (194 aa)
	K3ZWV4_SETIT	Uncharacterized protein. (215 aa)
	K3ZTZ8_SETIT	IPPc domain-containing protein. (397 aa)
	K3ZTZ2_SETIT	WD_REPEATS_REGION domain-containing protein. (398 aa)
	K3ZQ80_SETIT	V-SNARE coiled-coil homology domain-containing protein. (1095 aa)
	K3ZPX6_SETIT	SEC7 domain-containing protein. (1705 aa)
	K3ZJY6_SETIT	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. (192 aa)

Your Current Organism:

Setaria italica

NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A368Q9C8	K3YQ16_SETIT	A0A368Q9C8	K3YQ16	Uncharacterized protein.	Uncharacterized protein.	0.541
K3XM83_SETIT	K3XM88_SETIT	K3XM83	K3XM88	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	0.543
K3XM83_SETIT	K3Z9V6_SETIT	K3XM83	K3Z9V6	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	0.543
K3XM83_SETIT	K3ZIR6_SETIT	K3XM83	K3ZIR6	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	WD_REPEATS_REGION domain-containing protein.	0.987
K3XM83_SETIT	K3ZJY6_SETIT	K3XM83	K3ZJY6	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	0.545
K3XM83_SETIT	K3ZTZ2_SETIT	K3XM83	K3ZTZ2	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	WD_REPEATS_REGION domain-containing protein.	0.987
K3XM83_SETIT	K4ABM4_SETIT	K3XM83	K4ABM4	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	WD_REPEATS_REGION domain-containing protein.	0.987
K3XM88_SETIT	K3XM83_SETIT	K3XM88	K3XM83	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	0.543
K3XM88_SETIT	K3Z9V6_SETIT	K3XM88	K3Z9V6	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	0.543
K3XM88_SETIT	K3ZIR6_SETIT	K3XM88	K3ZIR6	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	WD_REPEATS_REGION domain-containing protein.	0.987
K3XM88_SETIT	K3ZJY6_SETIT	K3XM88	K3ZJY6	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	0.545
K3XM88_SETIT	K3ZTZ2_SETIT	K3XM88	K3ZTZ2	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	WD_REPEATS_REGION domain-containing protein.	0.987
K3XM88_SETIT	K4ABM4_SETIT	K3XM88	K4ABM4	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	WD_REPEATS_REGION domain-containing protein.	0.987
K3YQ16_SETIT	A0A368Q9C8	K3YQ16	A0A368Q9C8	Uncharacterized protein.	Uncharacterized protein.	0.541
K3Z9V6_SETIT	K3XM83_SETIT	K3Z9V6	K3XM83	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	0.543
K3Z9V6_SETIT	K3XM88_SETIT	K3Z9V6	K3XM88	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	0.543
K3Z9V6_SETIT	K3ZIR6_SETIT	K3Z9V6	K3ZIR6	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	WD_REPEATS_REGION domain-containing protein.	0.987
K3Z9V6_SETIT	K3ZJY6_SETIT	K3Z9V6	K3ZJY6	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	0.545
K3Z9V6_SETIT	K3ZTZ2_SETIT	K3Z9V6	K3ZTZ2	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	WD_REPEATS_REGION domain-containing protein.	0.987
K3Z9V6_SETIT	K4ABM4_SETIT	K3Z9V6	K4ABM4	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	WD_REPEATS_REGION domain-containing protein.	0.987

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