(10 nodes) Clathrin, heavy chain/VPS, 7-fold repeat network (Setaria italica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	K3YG20_SETIT	Pep3_Vps18 domain-containing protein. (994 aa)
	K3Z3E9_SETIT	Vacuolar protein sorting-associated protein 41 homolog; Required for vacuolar assembly and vacuolar traffic. (1034 aa)
	K3ZQF5_SETIT	Vacuolar protein sorting-associated protein 11 homolog; Involved in regulating membrane fusion at the tonoplast and the prevacuolar compartment. (957 aa)
	K3ZGW5_SETIT	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1710 aa)
	K3Z3K4_SETIT	CNH domain-containing protein. (936 aa)
	K4A5B8_SETIT	CNH domain-containing protein. (997 aa)
	A0A368QR49	Uncharacterized protein. (156 aa)
	A0A368QAN6	Vacuolar protein sorting-associated protein 41 homolog; Required for vacuolar assembly and vacuolar traffic. (950 aa)
	K3Y4M8_SETIT	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1710 aa)
	A0A0Q3UUU6	CNH domain-containing protein. (931 aa)

Your Current Organism:

Setaria italica

NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0Q3UUU6	A0A368QAN6	A0A0Q3UUU6	A0A368QAN6	CNH domain-containing protein.	Vacuolar protein sorting-associated protein 41 homolog; Required for vacuolar assembly and vacuolar traffic.	0.942
A0A0Q3UUU6	K3YG20_SETIT	A0A0Q3UUU6	K3YG20	CNH domain-containing protein.	Pep3_Vps18 domain-containing protein.	0.940
A0A0Q3UUU6	K3Z3E9_SETIT	A0A0Q3UUU6	K3Z3E9	CNH domain-containing protein.	Vacuolar protein sorting-associated protein 41 homolog; Required for vacuolar assembly and vacuolar traffic.	0.942
A0A0Q3UUU6	K3ZQF5_SETIT	A0A0Q3UUU6	K3ZQF5	CNH domain-containing protein.	Vacuolar protein sorting-associated protein 11 homolog; Involved in regulating membrane fusion at the tonoplast and the prevacuolar compartment.	0.975
A0A368QAN6	A0A0Q3UUU6	A0A368QAN6	A0A0Q3UUU6	Vacuolar protein sorting-associated protein 41 homolog; Required for vacuolar assembly and vacuolar traffic.	CNH domain-containing protein.	0.942
A0A368QAN6	K3YG20_SETIT	A0A368QAN6	K3YG20	Vacuolar protein sorting-associated protein 41 homolog; Required for vacuolar assembly and vacuolar traffic.	Pep3_Vps18 domain-containing protein.	0.985
A0A368QAN6	K3Z3K4_SETIT	A0A368QAN6	K3Z3K4	Vacuolar protein sorting-associated protein 41 homolog; Required for vacuolar assembly and vacuolar traffic.	CNH domain-containing protein.	0.914
A0A368QAN6	K3ZQF5_SETIT	A0A368QAN6	K3ZQF5	Vacuolar protein sorting-associated protein 41 homolog; Required for vacuolar assembly and vacuolar traffic.	Vacuolar protein sorting-associated protein 11 homolog; Involved in regulating membrane fusion at the tonoplast and the prevacuolar compartment.	0.990
A0A368QAN6	K4A5B8_SETIT	A0A368QAN6	K4A5B8	Vacuolar protein sorting-associated protein 41 homolog; Required for vacuolar assembly and vacuolar traffic.	CNH domain-containing protein.	0.942
K3Y4M8_SETIT	K3ZGW5_SETIT	K3Y4M8	K3ZGW5	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.900
K3YG20_SETIT	A0A0Q3UUU6	K3YG20	A0A0Q3UUU6	Pep3_Vps18 domain-containing protein.	CNH domain-containing protein.	0.940
K3YG20_SETIT	A0A368QAN6	K3YG20	A0A368QAN6	Pep3_Vps18 domain-containing protein.	Vacuolar protein sorting-associated protein 41 homolog; Required for vacuolar assembly and vacuolar traffic.	0.985
K3YG20_SETIT	K3Z3E9_SETIT	K3YG20	K3Z3E9	Pep3_Vps18 domain-containing protein.	Vacuolar protein sorting-associated protein 41 homolog; Required for vacuolar assembly and vacuolar traffic.	0.980
K3YG20_SETIT	K3Z3K4_SETIT	K3YG20	K3Z3K4	Pep3_Vps18 domain-containing protein.	CNH domain-containing protein.	0.929
K3YG20_SETIT	K3ZQF5_SETIT	K3YG20	K3ZQF5	Pep3_Vps18 domain-containing protein.	Vacuolar protein sorting-associated protein 11 homolog; Involved in regulating membrane fusion at the tonoplast and the prevacuolar compartment.	0.990
K3YG20_SETIT	K4A5B8_SETIT	K3YG20	K4A5B8	Pep3_Vps18 domain-containing protein.	CNH domain-containing protein.	0.940
K3Z3E9_SETIT	A0A0Q3UUU6	K3Z3E9	A0A0Q3UUU6	Vacuolar protein sorting-associated protein 41 homolog; Required for vacuolar assembly and vacuolar traffic.	CNH domain-containing protein.	0.942
K3Z3E9_SETIT	K3YG20_SETIT	K3Z3E9	K3YG20	Vacuolar protein sorting-associated protein 41 homolog; Required for vacuolar assembly and vacuolar traffic.	Pep3_Vps18 domain-containing protein.	0.980
K3Z3E9_SETIT	K3Z3K4_SETIT	K3Z3E9	K3Z3K4	Vacuolar protein sorting-associated protein 41 homolog; Required for vacuolar assembly and vacuolar traffic.	CNH domain-containing protein.	0.914
K3Z3E9_SETIT	K3ZQF5_SETIT	K3Z3E9	K3ZQF5	Vacuolar protein sorting-associated protein 41 homolog; Required for vacuolar assembly and vacuolar traffic.	Vacuolar protein sorting-associated protein 11 homolog; Involved in regulating membrane fusion at the tonoplast and the prevacuolar compartment.	0.987

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