(15 nodes) Gibberellin regulated protein network (Setaria italica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A368SM07	Uncharacterized protein. (101 aa)
	K3ZB74_SETIT	Uncharacterized protein. (91 aa)
	K3ZCV2_SETIT	Uncharacterized protein. (133 aa)
	K3ZL97_SETIT	Uncharacterized protein. (120 aa)
	A0A368QTT9	Uncharacterized protein. (220 aa)
	A0A368QZP5	Uncharacterized protein. (111 aa)
	A0A368S1H9	Uncharacterized protein. (79 aa)
	A0A368SEB4	Uncharacterized protein. (94 aa)
	A0A368Q7X3	Uncharacterized protein. (110 aa)
	K4AL12_SETIT	Uncharacterized protein. (75 aa)
	K4AH29_SETIT	Uncharacterized protein. (101 aa)
	K4A2U7_SETIT	Uncharacterized protein. (91 aa)
	K4A2D0_SETIT	Uncharacterized protein. (106 aa)
	K3YB08_SETIT	Uncharacterized protein. (110 aa)
	K3YDP4_SETIT	Uncharacterized protein. (107 aa)

Your Current Organism:

Setaria italica

NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A368Q7X3	A0A368QTT9	A0A368Q7X3	A0A368QTT9	Uncharacterized protein.	Uncharacterized protein.	0.522
A0A368Q7X3	A0A368QZP5	A0A368Q7X3	A0A368QZP5	Uncharacterized protein.	Uncharacterized protein.	0.474
A0A368Q7X3	A0A368S1H9	A0A368Q7X3	A0A368S1H9	Uncharacterized protein.	Uncharacterized protein.	0.528
A0A368Q7X3	A0A368SM07	A0A368Q7X3	A0A368SM07	Uncharacterized protein.	Uncharacterized protein.	0.524
A0A368Q7X3	K3YB08_SETIT	A0A368Q7X3	K3YB08	Uncharacterized protein.	Uncharacterized protein.	0.480
A0A368Q7X3	K3YDP4_SETIT	A0A368Q7X3	K3YDP4	Uncharacterized protein.	Uncharacterized protein.	0.532
A0A368Q7X3	K3ZB74_SETIT	A0A368Q7X3	K3ZB74	Uncharacterized protein.	Uncharacterized protein.	0.517
A0A368Q7X3	K3ZCV2_SETIT	A0A368Q7X3	K3ZCV2	Uncharacterized protein.	Uncharacterized protein.	0.474
A0A368Q7X3	K3ZL97_SETIT	A0A368Q7X3	K3ZL97	Uncharacterized protein.	Uncharacterized protein.	0.531
A0A368Q7X3	K4A2D0_SETIT	A0A368Q7X3	K4A2D0	Uncharacterized protein.	Uncharacterized protein.	0.474
A0A368Q7X3	K4AH29_SETIT	A0A368Q7X3	K4AH29	Uncharacterized protein.	Uncharacterized protein.	0.525
A0A368Q7X3	K4AL12_SETIT	A0A368Q7X3	K4AL12	Uncharacterized protein.	Uncharacterized protein.	0.522
A0A368QTT9	A0A368Q7X3	A0A368QTT9	A0A368Q7X3	Uncharacterized protein.	Uncharacterized protein.	0.522
A0A368QTT9	A0A368QZP5	A0A368QTT9	A0A368QZP5	Uncharacterized protein.	Uncharacterized protein.	0.432
A0A368QTT9	K3YB08_SETIT	A0A368QTT9	K3YB08	Uncharacterized protein.	Uncharacterized protein.	0.463
A0A368QTT9	K4A2U7_SETIT	A0A368QTT9	K4A2U7	Uncharacterized protein.	Uncharacterized protein.	0.522
A0A368QTT9	K4AH29_SETIT	A0A368QTT9	K4AH29	Uncharacterized protein.	Uncharacterized protein.	0.493
A0A368QZP5	A0A368Q7X3	A0A368QZP5	A0A368Q7X3	Uncharacterized protein.	Uncharacterized protein.	0.474
A0A368QZP5	A0A368QTT9	A0A368QZP5	A0A368QTT9	Uncharacterized protein.	Uncharacterized protein.	0.432
A0A368QZP5	A0A368S1H9	A0A368QZP5	A0A368S1H9	Uncharacterized protein.	Uncharacterized protein.	0.444

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