(48 nodes) Longin-like domain superfamily network (Setaria italica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	K4AMP6_SETIT	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (161 aa)
	A0A0Q3SIP0	Uncharacterized protein. (108 aa)
	A0A368Q5I5	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (234 aa)
	A0A368QC85	SRP54 domain-containing protein. (561 aa)
	A0A368QRA4	Uncharacterized protein; Belongs to the synaptobrevin family. (221 aa)
	A0A368R5E9	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (502 aa)
	A0A368RDN9	Uncharacterized protein; Belongs to the synaptobrevin family. (325 aa)
	A0A368RTX0	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (199 aa)
	A0A368RW92	Uncharacterized protein. (135 aa)
	A0A368SVE0	Uncharacterized protein; Belongs to the synaptobrevin family. (220 aa)
	K3XGQ5_SETIT	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (513 aa)
	K3XH19_SETIT	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (492 aa)
	K3XI14_SETIT	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (429 aa)
	K3XLT5_SETIT	Uncharacterized protein; Belongs to the synaptobrevin family. (218 aa)
	K3XLU0_SETIT	Uncharacterized protein; Belongs to the synaptobrevin family. (218 aa)
	K3XME2_SETIT	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (182 aa)
	K3XMG3_SETIT	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (178 aa)
	K3XSA9_SETIT	Uncharacterized protein; Belongs to the synaptobrevin family. (360 aa)
	K3XYQ8_SETIT	Uncharacterized protein; Belongs to the synaptobrevin family. (276 aa)
	K3XZN8_SETIT	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (161 aa)
	K3XZU9_SETIT	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (143 aa)
	K3XZX5_SETIT	Uncharacterized protein. (135 aa)
	K3Y6K8_SETIT	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (518 aa)
	K3YAM1_SETIT	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (143 aa)
	K3YCH5_SETIT	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (479 aa)
	K3YJ08_SETIT	Uncharacterized protein. (280 aa)
	K3YJ71_SETIT	Uncharacterized protein; Belongs to the synaptobrevin family. (262 aa)
	K3YJF1_SETIT	Uncharacterized protein; Belongs to the synaptobrevin family. (239 aa)
	K3YJY5_SETIT	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (166 aa)
	K3YK35_SETIT	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (143 aa)
	K3YSI8_SETIT	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (438 aa)
	K3YWM1_SETIT	Uncharacterized protein. (135 aa)
	K3YXV8_SETIT	Uncharacterized protein; Belongs to the synaptobrevin family. (223 aa)
	K3Z6J8_SETIT	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (417 aa)
	K3Z992_SETIT	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (237 aa)
	K3Z9F7_SETIT	Uncharacterized protein; Belongs to the synaptobrevin family. (222 aa)
	K3ZAK8_SETIT	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (142 aa)
	K3ZK69_SETIT	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (142 aa)
	K3ZT90_SETIT	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (450 aa)
	K4ANT0_SETIT	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (147 aa)
	K3ZWC9_SETIT	Uncharacterized protein; Belongs to the synaptobrevin family. (250 aa)
	K3ZWR7_SETIT	Uncharacterized protein; Belongs to the synaptobrevin family. (222 aa)
	K3ZXV6_SETIT	Uncharacterized protein. (143 aa)
	K4A395_SETIT	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (159 aa)
	K4A762_SETIT	SRP54 domain-containing protein. (621 aa)
	K4AE39_SETIT	Uncharacterized protein; Belongs to the synaptobrevin family. (252 aa)
	K4AG00_SETIT	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (166 aa)
	K4AJL0_SETIT	Uncharacterized protein; Belongs to the synaptobrevin family. (221 aa)

Your Current Organism:

Setaria italica

NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0Q3SIP0	A0A368RTX0	A0A0Q3SIP0	A0A368RTX0	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.922
A0A0Q3SIP0	K3XLT5_SETIT	A0A0Q3SIP0	K3XLT5	Uncharacterized protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.459
A0A0Q3SIP0	K3XLU0_SETIT	A0A0Q3SIP0	K3XLU0	Uncharacterized protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.459
A0A0Q3SIP0	K3XMG3_SETIT	A0A0Q3SIP0	K3XMG3	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.980
A0A0Q3SIP0	K3XSA9_SETIT	A0A0Q3SIP0	K3XSA9	Uncharacterized protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.796
A0A0Q3SIP0	K3XZU9_SETIT	A0A0Q3SIP0	K3XZU9	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.922
A0A0Q3SIP0	K3YAM1_SETIT	A0A0Q3SIP0	K3YAM1	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.922
A0A0Q3SIP0	K3ZXV6_SETIT	A0A0Q3SIP0	K3ZXV6	Uncharacterized protein.	Uncharacterized protein.	0.979
A0A368Q5I5	A0A368R5E9	A0A368Q5I5	A0A368R5E9	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	0.934
A0A368Q5I5	K3XGQ5_SETIT	A0A368Q5I5	K3XGQ5	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	0.934
A0A368Q5I5	K3XH19_SETIT	A0A368Q5I5	K3XH19	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	0.908
A0A368Q5I5	K3XLT5_SETIT	A0A368Q5I5	K3XLT5	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.521
A0A368Q5I5	K3XLU0_SETIT	A0A368Q5I5	K3XLU0	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.521
A0A368Q5I5	K3XME2_SETIT	A0A368Q5I5	K3XME2	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.	0.545
A0A368Q5I5	K3XSA9_SETIT	A0A368Q5I5	K3XSA9	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.739
A0A368Q5I5	K3Y6K8_SETIT	A0A368Q5I5	K3Y6K8	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	0.934
A0A368Q5I5	K3YCH5_SETIT	A0A368Q5I5	K3YCH5	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	0.908
A0A368Q5I5	K3Z992_SETIT	A0A368Q5I5	K3Z992	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.	0.560
A0A368Q5I5	K4ANT0_SETIT	A0A368Q5I5	K4ANT0	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.	0.540
A0A368QC85	K4A762_SETIT	A0A368QC85	K4A762	SRP54 domain-containing protein.	SRP54 domain-containing protein.	0.901

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