(129 nodes) Zinc finger, RING-type, conserved site network (Setaria italica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0Q3PCU2	RING-type domain-containing protein. (314 aa)
	A0A0Q3TIW8	RING-type domain-containing protein. (223 aa)
	A0A368PJL5	E3 ubiquitin protein ligase. (281 aa)
	A0A368PNP6	Uncharacterized protein. (1026 aa)
	A0A368PQ19	Uncharacterized protein. (188 aa)
	A0A368PVJ2	RING-type domain-containing protein. (342 aa)
	A0A368PX73	RING-type domain-containing protein. (254 aa)
	A0A368PXU5	RING-type domain-containing protein. (491 aa)
	A0A368Q0Y7	RBR-type E3 ubiquitin transferase. (847 aa)
	A0A368Q1A1	RBR-type E3 ubiquitin transferase. (350 aa)
	A0A368Q1P4	RING-type domain-containing protein. (524 aa)
	A0A368Q1Z0	RBR-type E3 ubiquitin transferase. (315 aa)
	A0A368Q4H2	Uncharacterized protein. (1049 aa)
	A0A368Q4M1	RBR-type E3 ubiquitin transferase. (529 aa)
	A0A368Q878	Uncharacterized protein. (1737 aa)
	A0A368Q9J0	RING-type domain-containing protein. (331 aa)
	A0A368QDY7	Uncharacterized protein. (585 aa)
	A0A368QL75	Uncharacterized protein. (1104 aa)
	A0A368R2F8	RING-type domain-containing protein. (379 aa)
	A0A368R455	RING-type domain-containing protein. (428 aa)
	A0A368RA81	Uncharacterized protein. (1265 aa)
	A0A368RC36	Uncharacterized protein. (1269 aa)
	A0A368RCC5	RING-type domain-containing protein. (546 aa)
	A0A368RCQ5	RING-type domain-containing protein. (573 aa)
	A0A368RDB4	RING-type domain-containing protein. (1141 aa)
	A0A368REY5	RING-type domain-containing protein. (343 aa)
	A0A368RG13	Uncharacterized protein. (1273 aa)
	A0A368RMB7	RBR-type E3 ubiquitin transferase. (223 aa)
	A0A368RMB9	RBR-type E3 ubiquitin transferase. (206 aa)
	A0A368RP79	RING-type domain-containing protein. (276 aa)
	A0A368RSF9	RING-type domain-containing protein. (268 aa)
	A0A368RWT3	RING-type domain-containing protein. (405 aa)
	A0A368RYG2	RBR-type E3 ubiquitin transferase. (551 aa)
	A0A368RZF4	Uncharacterized protein. (1033 aa)
	A0A368SC68	RING-type domain-containing protein. (191 aa)
	A0A368SD79	RING-type domain-containing protein. (319 aa)
	A0A368SDL0	RING-type domain-containing protein. (388 aa)
	A0A368SI72	RING-type domain-containing protein. (464 aa)
	A0A368SIT3	C2H2-type domain-containing protein. (491 aa)
	A0A368SJ03	E3 ubiquitin protein ligase. (858 aa)
	A0A368SL68	RING-type domain-containing protein. (337 aa)
	A0A368SP50	Uncharacterized protein. (519 aa)
	A0A368SPC2	Uncharacterized protein. (481 aa)
	K3XDY2_SETIT	Uncharacterized protein. (1185 aa)
	K3XDZ4_SETIT	RING-type domain-containing protein. (1138 aa)
	K3XGJ0_SETIT	RING-type domain-containing protein. (524 aa)
	K3XH87_SETIT	RING-type domain-containing protein. (481 aa)
	K3XJW4_SETIT	RING-type domain-containing protein. (331 aa)
	K3XKV5_SETIT	RING-type domain-containing protein. (273 aa)
	K3XLA9_SETIT	RING-type domain-containing protein. (248 aa)
	K3XLC7_SETIT	RING-type domain-containing protein. (245 aa)
	K3XUX3_SETIT	RING-type domain-containing protein. (1126 aa)
	K3XV84_SETIT	E3 ubiquitin protein ligase. (861 aa)
	K3XVG9_SETIT	Uncharacterized protein. (744 aa)
	K3XX75_SETIT	Uncharacterized protein. (417 aa)
	K3XXQ2_SETIT	Uncharacterized protein. (368 aa)
	K3Y4S3_SETIT	Uncharacterized protein. (1174 aa)
	K3Y555_SETIT	Uncharacterized protein. (854 aa)
	K3Y5U7_SETIT	RBR-type E3 ubiquitin transferase. (638 aa)
	K3Y606_SETIT	RBR-type E3 ubiquitin transferase. (601 aa)
	K3Y717_SETIT	RING-type domain-containing protein. (474 aa)
	K3Y9I1_SETIT	RING-type domain-containing protein. (259 aa)
	K3YCX5_SETIT	Uncharacterized protein. (362 aa)
	K3YD78_SETIT	RBR-type E3 ubiquitin transferase. (556 aa)
	K3YDQ8_SETIT	RBR-type E3 ubiquitin transferase. (456 aa)
	K3YH78_SETIT	Uncharacterized protein. (504 aa)
	K3YHD7_SETIT	Uncharacterized protein. (483 aa)
	K3YM55_SETIT	RBR-type E3 ubiquitin transferase. (203 aa)
	K3YME7_SETIT	RBR-type E3 ubiquitin transferase. (323 aa)
	K3YMJ8_SETIT	RING-type domain-containing protein. (521 aa)
	K3YPK4_SETIT	Uncharacterized protein. (1014 aa)
	K3YQ90_SETIT	RING-type domain-containing protein. (745 aa)
	K3YQG4_SETIT	Uncharacterized protein. (697 aa)
	K3YRH5_SETIT	RBR-type E3 ubiquitin transferase. (532 aa)
	K3YRW7_SETIT	Uncharacterized protein. (496 aa)
	K3YSV7_SETIT	Uncharacterized protein. (413 aa)
	K3YTI8_SETIT	Uncharacterized protein. (364 aa)
	K3YTY6_SETIT	RING-type domain-containing protein. (337 aa)
	K3YU04_SETIT	Uncharacterized protein. (331 aa)
	K3YV69_SETIT	RING-type domain-containing protein. (252 aa)
	K3YZW8_SETIT	RING-type domain-containing protein. (278 aa)
	K3Z340_SETIT	Uncharacterized protein. (1629 aa)
	K3Z3D4_SETIT	Uncharacterized protein. (1068 aa)
	K3Z3E1_SETIT	Uncharacterized protein. (1049 aa)
	K3Z3I7_SETIT	Uncharacterized protein. (965 aa)
	K3Z3X5_SETIT	Uncharacterized protein. (810 aa)
	K3Z451_SETIT	Uncharacterized protein. (737 aa)
	K3Z537_SETIT	RING-type domain-containing protein. (553 aa)
	K3Z5C7_SETIT	RBR-type E3 ubiquitin transferase. (527 aa)
	K3Z5I1_SETIT	RBR-type E3 ubiquitin transferase. (509 aa)
	K3Z5Q0_SETIT	RING-type domain-containing protein. (493 aa)
	K3Z5T4_SETIT	RING-type domain-containing protein. (484 aa)
	K3Z644_SETIT	RING-type domain-containing protein. (454 aa)
	K3Z6W6_SETIT	RING-type domain-containing protein. (391 aa)
	K3Z8Z7_SETIT	RING-type domain-containing protein. (255 aa)
	K3Z8Z9_SETIT	RING-type domain-containing protein. (255 aa)
	K3ZCD8_SETIT	RING-type domain-containing protein. (194 aa)
	K3ZCE9_SETIT	Uncharacterized protein. (440 aa)
	K3ZIZ7_SETIT	RING-type domain-containing protein. (361 aa)
	K3ZQQ3_SETIT	Uncharacterized protein. (832 aa)
	K3ZQX8_SETIT	Uncharacterized protein. (774 aa)
	K3ZR15_SETIT	Uncharacterized protein. (739 aa)
	K3ZRU4_SETIT	RBR-type E3 ubiquitin transferase. (581 aa)
	K3ZU24_SETIT	RING-type domain-containing protein. (393 aa)
	K3ZUR7_SETIT	RBR-type E3 ubiquitin transferase. (309 aa)
	K3ZVE2_SETIT	RBR-type E3 ubiquitin transferase. (317 aa)
	K3ZVS7_SETIT	RBR-type E3 ubiquitin transferase. (287 aa)
	K3ZWH7_SETIT	RING-type domain-containing protein. (242 aa)
	K3ZX17_SETIT	RING-type domain-containing protein. (200 aa)
	K3ZX43_SETIT	RING-type domain-containing protein. (195 aa)
	K4A0P4_SETIT	RBR-type E3 ubiquitin transferase. (534 aa)
	K4A0Z6_SETIT	Uncharacterized protein. (1771 aa)
	K4A1V2_SETIT	RBR-type E3 ubiquitin transferase. (511 aa)
	K4A5S6_SETIT	E3 ubiquitin protein ligase. (854 aa)
	K4A5U0_SETIT	E3 ubiquitin protein ligase. (843 aa)
	K4A676_SETIT	Uncharacterized protein. (753 aa)
	K4A6M5_SETIT	Uncharacterized protein. (681 aa)
	K4A6X5_SETIT	Uncharacterized protein. (643 aa)
	K4A8M5_SETIT	RING-type domain-containing protein. (514 aa)
	K4A954_SETIT	RING-type domain-containing protein. (486 aa)
	K4AAG4_SETIT	RING-type domain-containing protein. (417 aa)
	K4AC54_SETIT	Uncharacterized protein. (342 aa)
	K4ADV2_SETIT	RING-type domain-containing protein. (265 aa)
	K4ADY5_SETIT	RING-type domain-containing protein. (261 aa)
	K4AEC0_SETIT	RING-type domain-containing protein. (242 aa)
	K4AEL8_SETIT	RING-type domain-containing protein. (231 aa)
	K4AEV4_SETIT	RING-type domain-containing protein. (223 aa)
	K4AL76_SETIT	ABC transporter domain-containing protein. (1167 aa)
	K4ALH3_SETIT	zf-C3HC4 domain-containing protein. (90 aa)

Your Current Organism:

Setaria italica

NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A368PJL5	A0A368SJ03	A0A368PJL5	A0A368SJ03	E3 ubiquitin protein ligase.	E3 ubiquitin protein ligase.	0.640
A0A368PJL5	K3XV84_SETIT	A0A368PJL5	K3XV84	E3 ubiquitin protein ligase.	E3 ubiquitin protein ligase.	0.635
A0A368PJL5	K4A5U0_SETIT	A0A368PJL5	K4A5U0	E3 ubiquitin protein ligase.	E3 ubiquitin protein ligase.	0.543
A0A368PVJ2	A0A368RCC5	A0A368PVJ2	A0A368RCC5	RING-type domain-containing protein.	RING-type domain-containing protein.	0.812
A0A368PVJ2	A0A368SI72	A0A368PVJ2	A0A368SI72	RING-type domain-containing protein.	RING-type domain-containing protein.	0.812
A0A368PVJ2	K3XH87_SETIT	A0A368PVJ2	K3XH87	RING-type domain-containing protein.	RING-type domain-containing protein.	0.812
A0A368PVJ2	K3Z5Q0_SETIT	A0A368PVJ2	K3Z5Q0	RING-type domain-containing protein.	RING-type domain-containing protein.	0.812
A0A368PXU5	A0A368RCC5	A0A368PXU5	A0A368RCC5	RING-type domain-containing protein.	RING-type domain-containing protein.	0.812
A0A368PXU5	A0A368SI72	A0A368PXU5	A0A368SI72	RING-type domain-containing protein.	RING-type domain-containing protein.	0.844
A0A368PXU5	K3XH87_SETIT	A0A368PXU5	K3XH87	RING-type domain-containing protein.	RING-type domain-containing protein.	0.812
A0A368PXU5	K3Z5Q0_SETIT	A0A368PXU5	K3Z5Q0	RING-type domain-containing protein.	RING-type domain-containing protein.	0.827
A0A368Q878	K3YU04_SETIT	A0A368Q878	K3YU04	Uncharacterized protein.	Uncharacterized protein.	0.669
A0A368RA81	A0A368RDB4	A0A368RA81	A0A368RDB4	Uncharacterized protein.	RING-type domain-containing protein.	0.425
A0A368RA81	K3XDZ4_SETIT	A0A368RA81	K3XDZ4	Uncharacterized protein.	RING-type domain-containing protein.	0.426
A0A368RA81	K3XUX3_SETIT	A0A368RA81	K3XUX3	Uncharacterized protein.	RING-type domain-containing protein.	0.426
A0A368RCC5	A0A368PVJ2	A0A368RCC5	A0A368PVJ2	RING-type domain-containing protein.	RING-type domain-containing protein.	0.812
A0A368RCC5	A0A368PXU5	A0A368RCC5	A0A368PXU5	RING-type domain-containing protein.	RING-type domain-containing protein.	0.812
A0A368RCC5	A0A368SDL0	A0A368RCC5	A0A368SDL0	RING-type domain-containing protein.	RING-type domain-containing protein.	0.812
A0A368RCC5	K3Z5T4_SETIT	A0A368RCC5	K3Z5T4	RING-type domain-containing protein.	RING-type domain-containing protein.	0.812
A0A368RCC5	K4A8M5_SETIT	A0A368RCC5	K4A8M5	RING-type domain-containing protein.	RING-type domain-containing protein.	0.812

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