(5 nodes) Mixed, incl. Ribosomal protein L14p/L23e, and Ribosomal protein L13, bacterial-type network (Sorghum bicolor)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1B6Q9U9	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (292 aa)
	C5XFD0_SORBI	Uncharacterized protein. (199 aa)
	C5XFS1_SORBI	Uncharacterized protein. (318 aa)
	C5XI34_SORBI	Ribosomal_L18e/L15P domain-containing protein. (292 aa)
	C5YS26_SORBI	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family. (170 aa)

Your Current Organism:

Sorghum bicolor

NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1B6Q9U9	C5XFD0_SORBI	A0A1B6Q9U9	C5XFD0	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	Uncharacterized protein.	0.972
A0A1B6Q9U9	C5XFS1_SORBI	A0A1B6Q9U9	C5XFS1	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	Uncharacterized protein.	0.960
A0A1B6Q9U9	C5XI34_SORBI	A0A1B6Q9U9	C5XI34	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	Ribosomal_L18e/L15P domain-containing protein.	0.974
A0A1B6Q9U9	C5YS26_SORBI	A0A1B6Q9U9	C5YS26	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	0.964
C5XFD0_SORBI	A0A1B6Q9U9	C5XFD0	A0A1B6Q9U9	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	0.972
C5XFD0_SORBI	C5XFS1_SORBI	C5XFD0	C5XFS1	Uncharacterized protein.	Uncharacterized protein.	0.976
C5XFD0_SORBI	C5XI34_SORBI	C5XFD0	C5XI34	Uncharacterized protein.	Ribosomal_L18e/L15P domain-containing protein.	0.979
C5XFD0_SORBI	C5YS26_SORBI	C5XFD0	C5YS26	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	0.975
C5XFS1_SORBI	A0A1B6Q9U9	C5XFS1	A0A1B6Q9U9	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	0.960
C5XFS1_SORBI	C5XFD0_SORBI	C5XFS1	C5XFD0	Uncharacterized protein.	Uncharacterized protein.	0.976
C5XFS1_SORBI	C5XI34_SORBI	C5XFS1	C5XI34	Uncharacterized protein.	Ribosomal_L18e/L15P domain-containing protein.	0.964
C5XFS1_SORBI	C5YS26_SORBI	C5XFS1	C5YS26	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	0.961
C5XI34_SORBI	A0A1B6Q9U9	C5XI34	A0A1B6Q9U9	Ribosomal_L18e/L15P domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	0.974
C5XI34_SORBI	C5XFD0_SORBI	C5XI34	C5XFD0	Ribosomal_L18e/L15P domain-containing protein.	Uncharacterized protein.	0.979
C5XI34_SORBI	C5XFS1_SORBI	C5XI34	C5XFS1	Ribosomal_L18e/L15P domain-containing protein.	Uncharacterized protein.	0.964
C5XI34_SORBI	C5YS26_SORBI	C5XI34	C5YS26	Ribosomal_L18e/L15P domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	0.965
C5YS26_SORBI	A0A1B6Q9U9	C5YS26	A0A1B6Q9U9	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	0.964
C5YS26_SORBI	C5XFD0_SORBI	C5YS26	C5XFD0	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	Uncharacterized protein.	0.975
C5YS26_SORBI	C5XFS1_SORBI	C5YS26	C5XFS1	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	Uncharacterized protein.	0.961
C5YS26_SORBI	C5XI34_SORBI	C5YS26	C5XI34	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	Ribosomal_L18e/L15P domain-containing protein.	0.965

Server load: low (24%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About