STRINGSTRING
SORBI_3K024000 SORBI_3K024000 A0A194YJY9 A0A194YJY9 A0A194YR37 A0A194YR37 A0A1B6PS42 A0A1B6PS42 A0A1Z5RK96 A0A1Z5RK96 C5WWP8_SORBI C5WWP8_SORBI C5X4T4_SORBI C5X4T4_SORBI C5XBK5_SORBI C5XBK5_SORBI C5XE07_SORBI C5XE07_SORBI C5Z529_SORBI C5Z529_SORBI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SORBI_3K024000Tr-type G domain-containing protein. (175 aa)
A0A194YJY9Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (447 aa)
A0A194YR37UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (157 aa)
A0A1B6PS42TCTP domain-containing protein; Belongs to the TCTP family. (135 aa)
A0A1Z5RK96TCTP domain-containing protein; Belongs to the TCTP family. (167 aa)
C5WWP8_SORBIEF1_GNE domain-containing protein; Belongs to the EF-1-beta/EF-1-delta family. (226 aa)
C5X4T4_SORBIEF1_GNE domain-containing protein; Belongs to the EF-1-beta/EF-1-delta family. (218 aa)
C5XBK5_SORBIElongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (447 aa)
C5XE07_SORBIEF1_GNE domain-containing protein; Belongs to the EF-1-beta/EF-1-delta family. (227 aa)
C5Z529_SORBIUncharacterized protein. (417 aa)
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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