(19 nodes) tRNA 5-leader removal, and Endoribonuclease complex network (Sorghum bicolor)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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Others

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Your Input:
	A0A194YGY5	Uncharacterized protein. (292 aa)
	A0A194YJC4	POP4 domain-containing protein. (322 aa)
	A0A1B6P8Y7	POP4 domain-containing protein. (345 aa)
	A0A1B6PBC8	Uncharacterized protein. (719 aa)
	A0A1B6Q183	tRNA_int_end_N2 domain-containing protein. (262 aa)
	A0A1B6QF16	Uncharacterized protein. (603 aa)
	A0A1B6QGG3	Uncharacterized protein. (854 aa)
	A0A1B6QQB4	Alba domain-containing protein. (299 aa)
	A0A1W0VV94	tRNA_int_endo domain-containing protein. (307 aa)
	A0A1W0W5W9	tRNA_int_end_N2 domain-containing protein. (273 aa)
	A0A1W0W666	Thioredoxin-like_fold domain-containing protein. (238 aa)
	A0A1Z5RGN0	Uncharacterized protein. (725 aa)
	A0A1Z5RGU8	PRORP domain-containing protein. (77 aa)
	A0A1Z5RM09	Uncharacterized protein. (729 aa)
	C5WLV7_SORBI	Alba domain-containing protein. (345 aa)
	C5Y5J3_SORBI	Alba domain-containing protein. (275 aa)
	C5YD83_SORBI	Thioredoxin-like_fold domain-containing protein. (220 aa)
	C5YGG6_SORBI	Alba domain-containing protein. (261 aa)
	C5Z9E5_SORBI	Uncharacterized protein. (152 aa)

Your Current Organism:

Sorghum bicolor

NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A194YGY5	A0A1B6Q183	A0A194YGY5	A0A1B6Q183	Uncharacterized protein.	tRNA_int_end_N2 domain-containing protein.	0.531
A0A194YGY5	A0A1W0VV94	A0A194YGY5	A0A1W0VV94	Uncharacterized protein.	tRNA_int_endo domain-containing protein.	0.581
A0A194YGY5	A0A1W0W5W9	A0A194YGY5	A0A1W0W5W9	Uncharacterized protein.	tRNA_int_end_N2 domain-containing protein.	0.531
A0A194YJC4	A0A1B6P8Y7	A0A194YJC4	A0A1B6P8Y7	POP4 domain-containing protein.	POP4 domain-containing protein.	0.900
A0A194YJC4	A0A1B6PBC8	A0A194YJC4	A0A1B6PBC8	POP4 domain-containing protein.	Uncharacterized protein.	0.995
A0A194YJC4	A0A1B6Q183	A0A194YJC4	A0A1B6Q183	POP4 domain-containing protein.	tRNA_int_end_N2 domain-containing protein.	0.559
A0A194YJC4	A0A1B6QF16	A0A194YJC4	A0A1B6QF16	POP4 domain-containing protein.	Uncharacterized protein.	0.900
A0A194YJC4	A0A1B6QGG3	A0A194YJC4	A0A1B6QGG3	POP4 domain-containing protein.	Uncharacterized protein.	0.996
A0A194YJC4	A0A1B6QQB4	A0A194YJC4	A0A1B6QQB4	POP4 domain-containing protein.	Alba domain-containing protein.	0.676
A0A194YJC4	A0A1W0VV94	A0A194YJC4	A0A1W0VV94	POP4 domain-containing protein.	tRNA_int_endo domain-containing protein.	0.597
A0A194YJC4	A0A1W0W5W9	A0A194YJC4	A0A1W0W5W9	POP4 domain-containing protein.	tRNA_int_end_N2 domain-containing protein.	0.559
A0A194YJC4	A0A1W0W666	A0A194YJC4	A0A1W0W666	POP4 domain-containing protein.	Thioredoxin-like_fold domain-containing protein.	0.676
A0A194YJC4	A0A1Z5RGN0	A0A194YJC4	A0A1Z5RGN0	POP4 domain-containing protein.	Uncharacterized protein.	0.995
A0A194YJC4	A0A1Z5RGU8	A0A194YJC4	A0A1Z5RGU8	POP4 domain-containing protein.	PRORP domain-containing protein.	0.901
A0A194YJC4	A0A1Z5RM09	A0A194YJC4	A0A1Z5RM09	POP4 domain-containing protein.	Uncharacterized protein.	0.901
A0A194YJC4	C5WLV7_SORBI	A0A194YJC4	C5WLV7	POP4 domain-containing protein.	Alba domain-containing protein.	0.676
A0A194YJC4	C5Y5J3_SORBI	A0A194YJC4	C5Y5J3	POP4 domain-containing protein.	Alba domain-containing protein.	0.676
A0A194YJC4	C5YD83_SORBI	A0A194YJC4	C5YD83	POP4 domain-containing protein.	Thioredoxin-like_fold domain-containing protein.	0.676
A0A194YJC4	C5YGG6_SORBI	A0A194YJC4	C5YGG6	POP4 domain-containing protein.	Alba domain-containing protein.	0.966
A0A194YJC4	C5Z9E5_SORBI	A0A194YJC4	C5Z9E5	POP4 domain-containing protein.	Uncharacterized protein.	0.949

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