STRINGSTRING
A0A1B6Q0V4 A0A1B6Q0V4 A0A1B6QGM6 A0A1B6QGM6 A0A1Z5R960 A0A1Z5R960 A0A1Z5RIF0 A0A1Z5RIF0 A0A1Z5RLX2 A0A1Z5RLX2 C5WQ19_SORBI C5WQ19_SORBI C5XR23_SORBI C5XR23_SORBI C5XUA1_SORBI C5XUA1_SORBI C5YHG2_SORBI C5YHG2_SORBI C5YW08_SORBI C5YW08_SORBI C5YWL3_SORBI C5YWL3_SORBI C5YXB1_SORBI C5YXB1_SORBI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A1B6Q0V4CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. (601 aa)
A0A1B6QGM6RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of plastid-encoded RNA polymerase (PEP) to specific initiation sites and are then released. (555 aa)
A0A1Z5R960Fe-S_biosyn domain-containing protein. (159 aa)
A0A1Z5RIF0RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of plastid-encoded RNA polymerase (PEP) to specific initiation sites and are then released. (537 aa)
A0A1Z5RLX2Uncharacterized protein. (328 aa)
C5WQ19_SORBIRNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of plastid-encoded RNA polymerase (PEP) to specific initiation sites and are then released. (528 aa)
C5XR23_SORBICTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. (695 aa)
C5XUA1_SORBIPCRF domain-containing protein. (467 aa)
C5YHG2_SORBIRNA_pol_sigma70 domain-containing protein. (500 aa)
C5YW08_SORBICTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. (605 aa)
C5YWL3_SORBIUncharacterized protein. (501 aa)
C5YXB1_SORBIPCRF domain-containing protein. (409 aa)
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
Server load: low (26%) [HD]