(10 nodes) Cutin, suberine and wax biosynthesis network (Sorghum bicolor)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1B6QK61	Uncharacterized protein; Belongs to the cytochrome P450 family. (548 aa)
	A0A1W0VSC1	Uncharacterized protein. (227 aa)
	A0A1W0W0K2	Uncharacterized protein; Belongs to the cytochrome P450 family. (547 aa)
	C5WWT3_SORBI	Uncharacterized protein. (538 aa)
	C5XAP7_SORBI	Uncharacterized protein. (591 aa)
	C5XWK5_SORBI	Uncharacterized protein; Belongs to the cytochrome P450 family. (536 aa)
	C5YBZ6_SORBI	Uncharacterized protein. (307 aa)
	C5YFS1_SORBI	Uncharacterized protein; Belongs to the cytochrome P450 family. (544 aa)
	C5Z7Z5_SORBI	EF-hand domain-containing protein. (213 aa)
	C5Z857_SORBI	Uncharacterized protein; Belongs to the cytochrome P450 family. (521 aa)

Your Current Organism:

Sorghum bicolor

NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1B6QK61	A0A1W0VSC1	A0A1B6QK61	A0A1W0VSC1	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.656
A0A1B6QK61	C5XAP7_SORBI	A0A1B6QK61	C5XAP7	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.909
A0A1B6QK61	C5XWK5_SORBI	A0A1B6QK61	C5XWK5	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.904
A0A1B6QK61	C5YBZ6_SORBI	A0A1B6QK61	C5YBZ6	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.683
A0A1B6QK61	C5YFS1_SORBI	A0A1B6QK61	C5YFS1	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.916
A0A1B6QK61	C5Z7Z5_SORBI	A0A1B6QK61	C5Z7Z5	Uncharacterized protein; Belongs to the cytochrome P450 family.	EF-hand domain-containing protein.	0.656
A0A1B6QK61	C5Z857_SORBI	A0A1B6QK61	C5Z857	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.916
A0A1W0VSC1	A0A1B6QK61	A0A1W0VSC1	A0A1B6QK61	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.656
A0A1W0VSC1	A0A1W0W0K2	A0A1W0VSC1	A0A1W0W0K2	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.656
A0A1W0VSC1	C5WWT3_SORBI	A0A1W0VSC1	C5WWT3	Uncharacterized protein.	Uncharacterized protein.	0.901
A0A1W0VSC1	C5XAP7_SORBI	A0A1W0VSC1	C5XAP7	Uncharacterized protein.	Uncharacterized protein.	0.650
A0A1W0VSC1	C5XWK5_SORBI	A0A1W0VSC1	C5XWK5	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.656
A0A1W0VSC1	C5YFS1_SORBI	A0A1W0VSC1	C5YFS1	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.659
A0A1W0VSC1	C5Z857_SORBI	A0A1W0VSC1	C5Z857	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.659
A0A1W0W0K2	A0A1W0VSC1	A0A1W0W0K2	A0A1W0VSC1	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.656
A0A1W0W0K2	C5WWT3_SORBI	A0A1W0W0K2	C5WWT3	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.906
A0A1W0W0K2	C5XAP7_SORBI	A0A1W0W0K2	C5XAP7	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.909
A0A1W0W0K2	C5YBZ6_SORBI	A0A1W0W0K2	C5YBZ6	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.650
A0A1W0W0K2	C5YFS1_SORBI	A0A1W0W0K2	C5YFS1	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.916
A0A1W0W0K2	C5Z7Z5_SORBI	A0A1W0W0K2	C5Z7Z5	Uncharacterized protein; Belongs to the cytochrome P450 family.	EF-hand domain-containing protein.	0.656

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