(19 nodes) Stilbenoid, diarylheptanoid and gingerol biosynthesis, and cinnamoyl-CoA reductase activity network (Sorghum bicolor)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A194YU08	Epimerase domain-containing protein. (343 aa)
	A0A1B6Q1P9	Uncharacterized protein. (432 aa)
	A0A1B6Q1Q9	Uncharacterized protein. (440 aa)
	A0A1B6Q1R0	Uncharacterized protein. (374 aa)
	A0A1B6QLK8	Uncharacterized protein. (573 aa)
	C5X9A8_SORBI	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (404 aa)
	C5XAI4_SORBI	Uncharacterized protein. (435 aa)
	C5XCX0_SORBI	Uncharacterized protein. (453 aa)
	C5XCX2_SORBI	Uncharacterized protein. (433 aa)
	C5XFF3_SORBI	Uncharacterized protein. (555 aa)
	C5XPD4_SORBI	Uncharacterized protein. (453 aa)
	C5XQS9_SORBI	Uncharacterized protein. (415 aa)
	C5XQT0_SORBI	Uncharacterized protein. (434 aa)
	C5XV87_SORBI	Epimerase domain-containing protein. (331 aa)
	C5XXB7_SORBI	Uncharacterized protein. (448 aa)
	C5YBJ0_SORBI	Uncharacterized protein. (441 aa)
	C5YLL4_SORBI	Epimerase domain-containing protein. (374 aa)
	C5YLM3_SORBI	Uncharacterized protein. (443 aa)
	C5YLM4_SORBI	Uncharacterized protein. (446 aa)

Your Current Organism:

Sorghum bicolor

NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A194YU08	A0A1B6Q1P9	A0A194YU08	A0A1B6Q1P9	Epimerase domain-containing protein.	Uncharacterized protein.	0.805
A0A194YU08	A0A1B6Q1Q9	A0A194YU08	A0A1B6Q1Q9	Epimerase domain-containing protein.	Uncharacterized protein.	0.805
A0A194YU08	A0A1B6Q1R0	A0A194YU08	A0A1B6Q1R0	Epimerase domain-containing protein.	Uncharacterized protein.	0.805
A0A194YU08	A0A1B6QLK8	A0A194YU08	A0A1B6QLK8	Epimerase domain-containing protein.	Uncharacterized protein.	0.682
A0A194YU08	C5X9A8_SORBI	A0A194YU08	C5X9A8	Epimerase domain-containing protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	0.800
A0A194YU08	C5XAI4_SORBI	A0A194YU08	C5XAI4	Epimerase domain-containing protein.	Uncharacterized protein.	0.805
A0A194YU08	C5XCX0_SORBI	A0A194YU08	C5XCX0	Epimerase domain-containing protein.	Uncharacterized protein.	0.832
A0A194YU08	C5XCX2_SORBI	A0A194YU08	C5XCX2	Epimerase domain-containing protein.	Uncharacterized protein.	0.832
A0A194YU08	C5XFF3_SORBI	A0A194YU08	C5XFF3	Epimerase domain-containing protein.	Uncharacterized protein.	0.725
A0A194YU08	C5XPD4_SORBI	A0A194YU08	C5XPD4	Epimerase domain-containing protein.	Uncharacterized protein.	0.805
A0A194YU08	C5XQS9_SORBI	A0A194YU08	C5XQS9	Epimerase domain-containing protein.	Uncharacterized protein.	0.817
A0A194YU08	C5XQT0_SORBI	A0A194YU08	C5XQT0	Epimerase domain-containing protein.	Uncharacterized protein.	0.832
A0A194YU08	C5XXB7_SORBI	A0A194YU08	C5XXB7	Epimerase domain-containing protein.	Uncharacterized protein.	0.833
A0A194YU08	C5YBJ0_SORBI	A0A194YU08	C5YBJ0	Epimerase domain-containing protein.	Uncharacterized protein.	0.834
A0A194YU08	C5YLM3_SORBI	A0A194YU08	C5YLM3	Epimerase domain-containing protein.	Uncharacterized protein.	0.832
A0A194YU08	C5YLM4_SORBI	A0A194YU08	C5YLM4	Epimerase domain-containing protein.	Uncharacterized protein.	0.815
A0A1B6Q1P9	A0A194YU08	A0A1B6Q1P9	A0A194YU08	Uncharacterized protein.	Epimerase domain-containing protein.	0.805
A0A1B6Q1P9	A0A1B6Q1Q9	A0A1B6Q1P9	A0A1B6Q1Q9	Uncharacterized protein.	Uncharacterized protein.	0.654
A0A1B6Q1P9	A0A1B6Q1R0	A0A1B6Q1P9	A0A1B6Q1R0	Uncharacterized protein.	Uncharacterized protein.	0.655
A0A1B6Q1P9	A0A1B6QLK8	A0A1B6Q1P9	A0A1B6QLK8	Uncharacterized protein.	Uncharacterized protein.	0.775

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