(7 nodes) Mixed, incl. Protein of unknown function DUF3511, and F-box protein AUF1-like network (Sorghum bicolor)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A194YIK4	Uncharacterized protein. (87 aa)
	A0A1W0VTV7	GRAS domain-containing protein; Belongs to the GRAS family. (468 aa)
	A0A1W0W0M6	Uncharacterized protein. (118 aa)
	A0A1Z5R4Z5	OVATE domain-containing protein. (360 aa)
	C5WMK1_SORBI	Uncharacterized protein. (179 aa)
	C5X7X1_SORBI	Uncharacterized protein. (104 aa)
	C5Z075_SORBI	Uncharacterized protein. (354 aa)

Your Current Organism:

Sorghum bicolor

NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A194YIK4	A0A1W0VTV7	A0A194YIK4	A0A1W0VTV7	Uncharacterized protein.	GRAS domain-containing protein; Belongs to the GRAS family.	0.482
A0A194YIK4	A0A1W0W0M6	A0A194YIK4	A0A1W0W0M6	Uncharacterized protein.	Uncharacterized protein.	0.479
A0A194YIK4	A0A1Z5R4Z5	A0A194YIK4	A0A1Z5R4Z5	Uncharacterized protein.	OVATE domain-containing protein.	0.521
A0A194YIK4	C5WMK1_SORBI	A0A194YIK4	C5WMK1	Uncharacterized protein.	Uncharacterized protein.	0.445
A0A194YIK4	C5X7X1_SORBI	A0A194YIK4	C5X7X1	Uncharacterized protein.	Uncharacterized protein.	0.542
A0A194YIK4	C5Z075_SORBI	A0A194YIK4	C5Z075	Uncharacterized protein.	Uncharacterized protein.	0.524
A0A1W0VTV7	A0A194YIK4	A0A1W0VTV7	A0A194YIK4	GRAS domain-containing protein; Belongs to the GRAS family.	Uncharacterized protein.	0.482
A0A1W0VTV7	A0A1W0W0M6	A0A1W0VTV7	A0A1W0W0M6	GRAS domain-containing protein; Belongs to the GRAS family.	Uncharacterized protein.	0.517
A0A1W0VTV7	A0A1Z5R4Z5	A0A1W0VTV7	A0A1Z5R4Z5	GRAS domain-containing protein; Belongs to the GRAS family.	OVATE domain-containing protein.	0.501
A0A1W0VTV7	C5WMK1_SORBI	A0A1W0VTV7	C5WMK1	GRAS domain-containing protein; Belongs to the GRAS family.	Uncharacterized protein.	0.515
A0A1W0VTV7	C5X7X1_SORBI	A0A1W0VTV7	C5X7X1	GRAS domain-containing protein; Belongs to the GRAS family.	Uncharacterized protein.	0.472
A0A1W0VTV7	C5Z075_SORBI	A0A1W0VTV7	C5Z075	GRAS domain-containing protein; Belongs to the GRAS family.	Uncharacterized protein.	0.464
A0A1W0W0M6	A0A194YIK4	A0A1W0W0M6	A0A194YIK4	Uncharacterized protein.	Uncharacterized protein.	0.479
A0A1W0W0M6	A0A1W0VTV7	A0A1W0W0M6	A0A1W0VTV7	Uncharacterized protein.	GRAS domain-containing protein; Belongs to the GRAS family.	0.517
A0A1W0W0M6	A0A1Z5R4Z5	A0A1W0W0M6	A0A1Z5R4Z5	Uncharacterized protein.	OVATE domain-containing protein.	0.530
A0A1W0W0M6	C5WMK1_SORBI	A0A1W0W0M6	C5WMK1	Uncharacterized protein.	Uncharacterized protein.	0.519
A0A1W0W0M6	C5X7X1_SORBI	A0A1W0W0M6	C5X7X1	Uncharacterized protein.	Uncharacterized protein.	0.496
A0A1W0W0M6	C5Z075_SORBI	A0A1W0W0M6	C5Z075	Uncharacterized protein.	Uncharacterized protein.	0.472
A0A1Z5R4Z5	A0A194YIK4	A0A1Z5R4Z5	A0A194YIK4	OVATE domain-containing protein.	Uncharacterized protein.	0.521
A0A1Z5R4Z5	A0A1W0VTV7	A0A1Z5R4Z5	A0A1W0VTV7	OVATE domain-containing protein.	GRAS domain-containing protein; Belongs to the GRAS family.	0.501

page 1 of 3

Server load: low (22%) [HD]

Permalink

Network

Cooccurrence

Experiments

Neighborhood

Databases

Fusion

Textmining

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About