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A0A1B6Q803 A0A1B6Q803 A0A1B6QEI3 A0A1B6QEI3 A0A1W0VY77 A0A1W0VY77 A0A1Z5R884 A0A1Z5R884 A0A1Z5R8A7 A0A1Z5R8A7 A0A1Z5REZ2 A0A1Z5REZ2 C5WUY3_SORBI C5WUY3_SORBI C5WYL0_SORBI C5WYL0_SORBI C5WZ58_SORBI C5WZ58_SORBI C5X0R7_SORBI C5X0R7_SORBI C5X139_SORBI C5X139_SORBI C5X165_SORBI C5X165_SORBI C5X2H9_SORBI C5X2H9_SORBI C5X383_SORBI C5X383_SORBI C5XMV7_SORBI C5XMV7_SORBI C5XTR1_SORBI C5XTR1_SORBI C5XUT0_SORBI C5XUT0_SORBI C5XV27_SORBI C5XV27_SORBI TRM5_SORBI TRM5_SORBI C5XZR0_SORBI C5XZR0_SORBI C5YB95_SORBI C5YB95_SORBI C5YBR5_SORBI C5YBR5_SORBI C5YY11_SORBI C5YY11_SORBI
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
A0A1B6Q803tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6; Substrate-binding subunit of tRNA (adenine-N1-)- methyltransferase, which catalyzes the formation of N1-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA. (480 aa)
A0A1B6QEI3SAM_MT_TRM5_TYW2 domain-containing protein. (1081 aa)
A0A1W0VY77Uncharacterized protein. (152 aa)
A0A1Z5R884SAM_MT_TRM5_TYW2 domain-containing protein. (425 aa)
A0A1Z5R8A7DUF2428 domain-containing protein. (2162 aa)
A0A1Z5REZ2Uncharacterized protein. (338 aa)
C5WUY3_SORBIMTS domain-containing protein. (280 aa)
C5WYL0_SORBIPseudoU_synth_1 domain-containing protein. (459 aa)
C5WZ58_SORBIFlavodoxin-like domain-containing protein. (1310 aa)
C5X0R7_SORBIPseudoU_synth_1 domain-containing protein. (520 aa)
C5X139_SORBIWD_REPEATS_REGION domain-containing protein. (1327 aa)
C5X165_SORBItRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family. (434 aa)
C5X2H9_SORBIUncharacterized protein. (131 aa)
C5X383_SORBITRUD domain-containing protein. (705 aa)
C5XMV7_SORBIUncharacterized protein. (280 aa)
C5XTR1_SORBItRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family. (254 aa)
C5XUT0_SORBIUPF0020 domain-containing protein. (471 aa)
C5XV27_SORBIPutative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs. (317 aa)
TRM5_SORBItRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the class I-like SAM-binding methyltransferase superfamily. TRM5/TYW2 family. (465 aa)
C5XZR0_SORBISAM-dependent MTase TRM10-type domain-containing protein. (399 aa)
C5YB95_SORBIC3H1-type domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (862 aa)
C5YBR5_SORBItRNA-dihydrouridine(47) synthase [NAD(P)(+)]. (679 aa)
C5YY11_SORBItRNA (adenine(58)-N(1))-methyltransferase. (322 aa)
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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