(5 nodes) tRNA 3-trailer cleavage, endonucleolytic network (Sorghum bicolor)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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Predicted Interactions

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Your Input:
	A0A1W0W5J5	Lactamase_B domain-containing protein. (444 aa)
	A0A1Z5RM43	Lactamase_B domain-containing protein. (315 aa)
	C5WRH8_SORBI	Uncharacterized protein. (291 aa)
	C5XJM3_SORBI	Uncharacterized protein. (932 aa)
	C5XZI2_SORBI	Lactamase_B domain-containing protein. (315 aa)

Your Current Organism:

Sorghum bicolor

NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1W0W5J5	A0A1Z5RM43	A0A1W0W5J5	A0A1Z5RM43	Lactamase_B domain-containing protein.	Lactamase_B domain-containing protein.	0.902
A0A1W0W5J5	C5WRH8_SORBI	A0A1W0W5J5	C5WRH8	Lactamase_B domain-containing protein.	Uncharacterized protein.	0.741
A0A1W0W5J5	C5XJM3_SORBI	A0A1W0W5J5	C5XJM3	Lactamase_B domain-containing protein.	Uncharacterized protein.	0.948
A0A1W0W5J5	C5XZI2_SORBI	A0A1W0W5J5	C5XZI2	Lactamase_B domain-containing protein.	Lactamase_B domain-containing protein.	0.902
A0A1Z5RM43	A0A1W0W5J5	A0A1Z5RM43	A0A1W0W5J5	Lactamase_B domain-containing protein.	Lactamase_B domain-containing protein.	0.902
A0A1Z5RM43	C5WRH8_SORBI	A0A1Z5RM43	C5WRH8	Lactamase_B domain-containing protein.	Uncharacterized protein.	0.741
A0A1Z5RM43	C5XJM3_SORBI	A0A1Z5RM43	C5XJM3	Lactamase_B domain-containing protein.	Uncharacterized protein.	0.947
A0A1Z5RM43	C5XZI2_SORBI	A0A1Z5RM43	C5XZI2	Lactamase_B domain-containing protein.	Lactamase_B domain-containing protein.	0.901
C5WRH8_SORBI	A0A1W0W5J5	C5WRH8	A0A1W0W5J5	Uncharacterized protein.	Lactamase_B domain-containing protein.	0.741
C5WRH8_SORBI	A0A1Z5RM43	C5WRH8	A0A1Z5RM43	Uncharacterized protein.	Lactamase_B domain-containing protein.	0.741
C5WRH8_SORBI	C5XJM3_SORBI	C5WRH8	C5XJM3	Uncharacterized protein.	Uncharacterized protein.	0.874
C5WRH8_SORBI	C5XZI2_SORBI	C5WRH8	C5XZI2	Uncharacterized protein.	Lactamase_B domain-containing protein.	0.741
C5XJM3_SORBI	A0A1W0W5J5	C5XJM3	A0A1W0W5J5	Uncharacterized protein.	Lactamase_B domain-containing protein.	0.948
C5XJM3_SORBI	A0A1Z5RM43	C5XJM3	A0A1Z5RM43	Uncharacterized protein.	Lactamase_B domain-containing protein.	0.947
C5XJM3_SORBI	C5WRH8_SORBI	C5XJM3	C5WRH8	Uncharacterized protein.	Uncharacterized protein.	0.874
C5XJM3_SORBI	C5XZI2_SORBI	C5XJM3	C5XZI2	Uncharacterized protein.	Lactamase_B domain-containing protein.	0.947
C5XZI2_SORBI	A0A1W0W5J5	C5XZI2	A0A1W0W5J5	Lactamase_B domain-containing protein.	Lactamase_B domain-containing protein.	0.902
C5XZI2_SORBI	A0A1Z5RM43	C5XZI2	A0A1Z5RM43	Lactamase_B domain-containing protein.	Lactamase_B domain-containing protein.	0.901
C5XZI2_SORBI	C5WRH8_SORBI	C5XZI2	C5WRH8	Lactamase_B domain-containing protein.	Uncharacterized protein.	0.741
C5XZI2_SORBI	C5XJM3_SORBI	C5XZI2	C5XJM3	Lactamase_B domain-containing protein.	Uncharacterized protein.	0.947

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