(62 nodes) Mostly uncharacterized, incl. Protein of unknown function (DUF1645), and Transcription factor IBH1-like network (Sorghum bicolor)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A194YMJ8	Uncharacterized protein. (284 aa)
	A0A194YN36	Uncharacterized protein. (241 aa)
	A0A194YQT4	Uncharacterized protein. (248 aa)
	A0A1B6PBN2	PORR domain-containing protein. (403 aa)
	A0A1B6PLT2	Uncharacterized protein. (252 aa)
	A0A1B6Q3D4	Uncharacterized protein. (1650 aa)
	A0A1B6QFJ9	Uncharacterized protein. (1353 aa)
	A0A1B6QJ50	PORR domain-containing protein. (421 aa)
	A0A1B6QKC0	WD_REPEATS_REGION domain-containing protein. (625 aa)
	A0A1B6QPF3	SANT domain-containing protein. (728 aa)
	A0A1B6QPM5	Uncharacterized protein. (536 aa)
	A0A1B6QQ45	Smr domain-containing protein. (513 aa)
	A0A1B6QQN4	SANT domain-containing protein. (736 aa)
	A0A1W0VUP5	Uncharacterized protein. (269 aa)
	A0A1W0VWZ0	RING-type domain-containing protein. (428 aa)
	A0A1W0W125	Uncharacterized protein. (178 aa)
	A0A1W0W215	Uncharacterized protein. (602 aa)
	A0A1W0W226	C2H2-type domain-containing protein. (170 aa)
	A0A1W0W2X4	Uncharacterized protein. (368 aa)
	A0A1W0W594	Uncharacterized protein. (157 aa)
	A0A1W0W5J3	F-box domain-containing protein. (520 aa)
	A0A1Z5RB43	Uncharacterized protein. (235 aa)
	A0A1Z5RD84	Uncharacterized protein. (1045 aa)
	C5WN75_SORBI	Tify domain-containing protein. (168 aa)
	C5WN77_SORBI	Tify domain-containing protein. (175 aa)
	C5WRY8_SORBI	Uncharacterized protein. (127 aa)
	C5WU12_SORBI	Uncharacterized protein. (658 aa)
	C5WVG7_SORBI	Cystatin domain-containing protein; Belongs to the cystatin family. (126 aa)
	C5WWZ4_SORBI	Uncharacterized protein. (191 aa)
	C5X0S0_SORBI	Uncharacterized protein. (545 aa)
	C5X5L1_SORBI	Uncharacterized protein. (578 aa)
	C5X604_SORBI	Uncharacterized protein. (92 aa)
	C5X6I8_SORBI	Uncharacterized protein. (640 aa)
	C5XD97_SORBI	Uncharacterized protein. (514 aa)
	C5XDP2_SORBI	Tify domain-containing protein. (221 aa)
	C5XEK1_SORBI	Uncharacterized protein. (277 aa)
	C5XFW7_SORBI	Uncharacterized protein. (271 aa)
	C5XGF9_SORBI	RING-type domain-containing protein. (434 aa)
	C5XLV7_SORBI	RAP domain-containing protein. (640 aa)
	C5XTC3_SORBI	PORR domain-containing protein. (394 aa)
	C5XTL9_SORBI	Uncharacterized protein. (249 aa)
	C5XUD1_SORBI	Uncharacterized protein. (228 aa)
	C5XV18_SORBI	Uncharacterized protein. (552 aa)
	C5XXR9_SORBI	Uncharacterized protein. (154 aa)
	C5XYB1_SORBI	Uncharacterized protein. (365 aa)
	C5XYM7_SORBI	Uncharacterized protein. (349 aa)
	C5Y0C7_SORBI	Uncharacterized protein. (212 aa)
	C5Y0D4_SORBI	LAGLIDADG_2 domain-containing protein. (794 aa)
	C5Y904_SORBI	Uncharacterized protein. (531 aa)
	C5YC04_SORBI	Uncharacterized protein. (140 aa)
	C5YIA0_SORBI	Uncharacterized protein. (444 aa)
	C5YJA3_SORBI	Uncharacterized protein. (506 aa)
	C5YJU4_SORBI	Uncharacterized protein. (207 aa)
	C5YLT0_SORBI	Uncharacterized protein. (140 aa)
	C5YM84_SORBI	F-box domain-containing protein. (421 aa)
	C5YPA1_SORBI	Fibronectin type-III domain-containing protein. (698 aa)
	C5YPP5_SORBI	Uncharacterized protein. (189 aa)
	C5YQ97_SORBI	Uncharacterized protein. (327 aa)
	C5YVH0_SORBI	Uncharacterized protein. (363 aa)
	C5YW47_SORBI	Uncharacterized protein. (307 aa)
	C5Z3C2_SORBI	Uncharacterized protein. (314 aa)
	C5Z6D5_SORBI	WRC domain-containing protein. (306 aa)

Your Current Organism:

Sorghum bicolor

NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A194YMJ8	A0A194YN36	A0A194YMJ8	A0A194YN36	Uncharacterized protein.	Uncharacterized protein.	0.489
A0A194YMJ8	A0A194YQT4	A0A194YMJ8	A0A194YQT4	Uncharacterized protein.	Uncharacterized protein.	0.458
A0A194YMJ8	A0A1B6PBN2	A0A194YMJ8	A0A1B6PBN2	Uncharacterized protein.	PORR domain-containing protein.	0.417
A0A194YMJ8	A0A1B6PLT2	A0A194YMJ8	A0A1B6PLT2	Uncharacterized protein.	Uncharacterized protein.	0.481
A0A194YMJ8	A0A1B6QFJ9	A0A194YMJ8	A0A1B6QFJ9	Uncharacterized protein.	Uncharacterized protein.	0.455
A0A194YMJ8	A0A1B6QPM5	A0A194YMJ8	A0A1B6QPM5	Uncharacterized protein.	Uncharacterized protein.	0.484
A0A194YMJ8	A0A1W0VWZ0	A0A194YMJ8	A0A1W0VWZ0	Uncharacterized protein.	RING-type domain-containing protein.	0.493
A0A194YMJ8	A0A1W0W125	A0A194YMJ8	A0A1W0W125	Uncharacterized protein.	Uncharacterized protein.	0.484
A0A194YMJ8	A0A1W0W594	A0A194YMJ8	A0A1W0W594	Uncharacterized protein.	Uncharacterized protein.	0.462
A0A194YMJ8	C5WN77_SORBI	A0A194YMJ8	C5WN77	Uncharacterized protein.	Tify domain-containing protein.	0.474
A0A194YMJ8	C5WRY8_SORBI	A0A194YMJ8	C5WRY8	Uncharacterized protein.	Uncharacterized protein.	0.424
A0A194YMJ8	C5X5L1_SORBI	A0A194YMJ8	C5X5L1	Uncharacterized protein.	Uncharacterized protein.	0.434
A0A194YMJ8	C5X604_SORBI	A0A194YMJ8	C5X604	Uncharacterized protein.	Uncharacterized protein.	0.434
A0A194YMJ8	C5X6I8_SORBI	A0A194YMJ8	C5X6I8	Uncharacterized protein.	Uncharacterized protein.	0.485
A0A194YMJ8	C5XD97_SORBI	A0A194YMJ8	C5XD97	Uncharacterized protein.	Uncharacterized protein.	0.436
A0A194YMJ8	C5XDP2_SORBI	A0A194YMJ8	C5XDP2	Uncharacterized protein.	Tify domain-containing protein.	0.430
A0A194YMJ8	C5XGF9_SORBI	A0A194YMJ8	C5XGF9	Uncharacterized protein.	RING-type domain-containing protein.	0.504
A0A194YMJ8	C5XLV7_SORBI	A0A194YMJ8	C5XLV7	Uncharacterized protein.	RAP domain-containing protein.	0.412
A0A194YMJ8	C5XTC3_SORBI	A0A194YMJ8	C5XTC3	Uncharacterized protein.	PORR domain-containing protein.	0.436
A0A194YMJ8	C5XUD1_SORBI	A0A194YMJ8	C5XUD1	Uncharacterized protein.	Uncharacterized protein.	0.435

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