(14 nodes) Mixed, incl. Ysc84 actin-binding domain, and O-linked glycosylation of mucins network (Sorghum bicolor)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1B6PE91	Uncharacterized protein. (971 aa)
	A0A1W0W2Y0	Uncharacterized protein. (401 aa)
	A0A1W0W7E4	FYVE-type domain-containing protein. (461 aa)
	A0A1Z5R1R0	FYVE-type domain-containing protein. (322 aa)
	A0A1Z5RJQ1	Ricin B-type lectin domain-containing protein. (341 aa)
	A0A1Z5S4V2	rRNA N-glycosidase. (303 aa)
	C5WVX1_SORBI	Cystatin domain-containing protein. (178 aa)
	C5X1Y4_SORBI	rRNA N-glycosidase. (623 aa)
	C5XBL1_SORBI	Arf-GAP domain-containing protein. (473 aa)
	C5XIF0_SORBI	Uncharacterized protein; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily. (1481 aa)
	C5XJ58_SORBI	Uncharacterized protein. (246 aa)
	C5XYL4_SORBI	FYVE-type domain-containing protein. (532 aa)
	C5YXD0_SORBI	Uncharacterized protein. (385 aa)
	C5Z4I2_SORBI	FYVE-type domain-containing protein. (534 aa)

Your Current Organism:

Sorghum bicolor

NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1B6PE91	C5WVX1_SORBI	A0A1B6PE91	C5WVX1	Uncharacterized protein.	Cystatin domain-containing protein.	0.460
A0A1W0W2Y0	C5WVX1_SORBI	A0A1W0W2Y0	C5WVX1	Uncharacterized protein.	Cystatin domain-containing protein.	0.460
A0A1W0W7E4	C5YXD0_SORBI	A0A1W0W7E4	C5YXD0	FYVE-type domain-containing protein.	Uncharacterized protein.	0.409
A0A1Z5R1R0	C5YXD0_SORBI	A0A1Z5R1R0	C5YXD0	FYVE-type domain-containing protein.	Uncharacterized protein.	0.409
C5WVX1_SORBI	A0A1B6PE91	C5WVX1	A0A1B6PE91	Cystatin domain-containing protein.	Uncharacterized protein.	0.460
C5WVX1_SORBI	A0A1W0W2Y0	C5WVX1	A0A1W0W2Y0	Cystatin domain-containing protein.	Uncharacterized protein.	0.460
C5WVX1_SORBI	C5XBL1_SORBI	C5WVX1	C5XBL1	Cystatin domain-containing protein.	Arf-GAP domain-containing protein.	0.864
C5WVX1_SORBI	C5YXD0_SORBI	C5WVX1	C5YXD0	Cystatin domain-containing protein.	Uncharacterized protein.	0.864
C5XBL1_SORBI	C5WVX1_SORBI	C5XBL1	C5WVX1	Arf-GAP domain-containing protein.	Cystatin domain-containing protein.	0.864
C5XYL4_SORBI	C5YXD0_SORBI	C5XYL4	C5YXD0	FYVE-type domain-containing protein.	Uncharacterized protein.	0.409
C5YXD0_SORBI	A0A1W0W7E4	C5YXD0	A0A1W0W7E4	Uncharacterized protein.	FYVE-type domain-containing protein.	0.409
C5YXD0_SORBI	A0A1Z5R1R0	C5YXD0	A0A1Z5R1R0	Uncharacterized protein.	FYVE-type domain-containing protein.	0.409
C5YXD0_SORBI	C5WVX1_SORBI	C5YXD0	C5WVX1	Uncharacterized protein.	Cystatin domain-containing protein.	0.864
C5YXD0_SORBI	C5XYL4_SORBI	C5YXD0	C5XYL4	Uncharacterized protein.	FYVE-type domain-containing protein.	0.409
C5YXD0_SORBI	C5Z4I2_SORBI	C5YXD0	C5Z4I2	Uncharacterized protein.	FYVE-type domain-containing protein.	0.409
C5Z4I2_SORBI	C5YXD0_SORBI	C5Z4I2	C5YXD0	FYVE-type domain-containing protein.	Uncharacterized protein.	0.409

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